Information for 10-TMTTTTCTGTCACTAW (Motif 12)

A C G T G T A C A C G T C G A T A C G T A C G T A G T C A C G T C T A G A C G T A T G C C G T A G T A C A C G T T C G A C G T A
Reverse Opposite:
C G A T A G C T C G T A A C T G C G A T A T C G G T C A A G T C C G T A A C T G C G T A C G T A C G T A C G T A A C T G G T C A
p-value:1e-10
log p-value:-2.343e+01
Information Content per bp:1.807
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.84%
Number of Background Sequences with motif4.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets46.3 +/- 27.7bp
Average Position of motif in Background57.7 +/- 33.5bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.62
Offset:5
Orientation:forward strand
Alignment:TMTTTTCTGTCACTAW-
-----NCTGTCAATCAN
 A C G T G T A C A C G T C G A T A C G T A C G T A G T C A C G T C T A G A C G T A T G C C G T A G T A C A C G T T C G A C G T A A C G T
A C G T A C G T A C G T A C G T A C G T T A G C T A G C G A C T C T A G A G C T A G T C G T C A T G C A A C G T A T G C G C T A T G C A

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:2
Score:0.60
Offset:1
Orientation:forward strand
Alignment:TMTTTTCTGTCACTAW
-ATTTCCTGTN-----
 A C G T G T A C A C G T C G A T A C G T A C G T A G T C A C G T C T A G A C G T A T G C C G T A G T A C A C G T T C G A C G T A
A C G T T C G A A G C T A C G T A C G T A G T C A G T C A C G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T A C G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:TMTTTTCTGTCACTAW
---TGTCTGDCACCT-
 A C G T G T A C A C G T C G A T A C G T A C G T A G T C A C G T C T A G A C G T A T G C C G T A G T A C A C G T T C G A C G T A
A C G T A C G T A C G T G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T A C G T

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:4
Score:0.59
Offset:4
Orientation:forward strand
Alignment:TMTTTTCTGTCACTAW
----GSCTGTCACTCA
 A C G T G T A C A C G T C G A T A C G T A C G T A G T C A C G T C T A G A C G T A T G C C G T A G T A C A C G T T C G A C G T A
A C G T A C G T A C G T A C G T C T A G A T G C A T G C C G A T A C T G G A C T A T G C G C T A T G A C A G C T T A G C G C T A

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:5
Score:0.58
Offset:5
Orientation:forward strand
Alignment:TMTTTTCTGTCACTAW-
-----SCTGTCAVTCAV
 A C G T G T A C A C G T C G A T A C G T A C G T A G T C A C G T C T A G A C G T A T G C C G T A G T A C A C G T T C G A C G T A A C G T
A C G T A C G T A C G T A C G T A C G T T A C G A T G C G A C T A C T G A G C T A G T C G T C A T G C A A C G T A G T C G C T A T G C A

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:6
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:TMTTTTCTGTCACTAW
-ATTTCCTGTN-----
 A C G T G T A C A C G T C G A T A C G T A C G T A G T C A C G T C T A G A C G T A T G C C G T A G T A C A C G T T C G A C G T A
A C G T C T G A A G C T A C G T A C G T A G T C A G T C A C G T A C T G G A C T A C G T A C G T A C G T A C G T A C G T A C G T

Gata1/MA0035.3/Jaspar

Match Rank:7
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-TMTTTTCTGTCACTAW
TTCTTATCTGT------
 A C G T A C G T G T A C A C G T C G A T A C G T A C G T A G T C A C G T C T A G A C G T A T G C C G T A G T A C A C G T T C G A C G T A
A G C T A G C T A G T C A G C T A C G T C G T A A C G T A G T C C G A T A T C G G A C T A C G T A C G T A C G T A C G T A C G T A C G T

GATA3/MA0037.2/Jaspar

Match Rank:8
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:TMTTTTCTGTCACTAW
TCTTATCT--------
 A C G T G T A C A C G T C G A T A C G T A C G T A G T C A C G T C T A G A C G T A T G C C G T A G T A C A C G T T C G A C G T A
A G C T A G T C A C G T A C G T C G T A A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MEIS2/MA0774.1/Jaspar

Match Rank:9
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:TMTTTTCTGTCACTAW
-----GCTGTCAA---
 A C G T G T A C A C G T C G A T A C G T A C G T A G T C A C G T C T A G A C G T A T G C C G T A G T A C A C G T T C G A C G T A
A C G T A C G T A C G T A C G T A C G T A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A A C G T A C G T A C G T

MEIS3/MA0775.1/Jaspar

Match Rank:10
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:TMTTTTCTGTCACTAW
-----CCTGTCAA---
 A C G T G T A C A C G T C G A T A C G T A C G T A G T C A C G T C T A G A C G T A T G C C G T A G T A C A C G T T C G A C G T A
A C G T A C G T A C G T A C G T A C G T T A G C T G A C G A C T C T A G G A C T A T G C C G T A G C T A A C G T A C G T A C G T