Information for 18-TGCACAGAGAAAGAGM (Motif 29)

A C G T A C T G A G T C C G T A A T G C C T G A A C T G C G T A A C T G C G T A G T C A C G T A A C T G C G T A A C T G G T A C
Reverse Opposite:
A C G T A G T C A C G T A G T C A C G T A C G T A C G T A G T C A C G T A G T C A G C T A T C G A C G T A C T G A G T C G T C A
p-value:1e-8
log p-value:-1.998e+01
Information Content per bp:1.898
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.57%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets43.8 +/- 23.7bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:TGCACAGAGAAAGAGM
--GAAAGTGAAAGT--
 A C G T A C T G A G T C C G T A A T G C C T G A A C T G C G T A A C T G C G T A G T C A C G T A A C T G C G T A A C T G G T A C
A C G T A C G T T C A G C G T A T G C A C T G A C T A G C G A T C T A G G C T A T C G A C G T A A C T G A G C T A C G T A C G T

PRDM1/MA0508.1/Jaspar

Match Rank:2
Score:0.57
Offset:1
Orientation:forward strand
Alignment:TGCACAGAGAAAGAGM
-AGAAAGTGAAAGTGA
 A C G T A C T G A G T C C G T A A T G C C T G A A C T G C G T A A C T G C G T A G T C A C G T A A C T G C G T A A C T G G T A C
A C G T C G T A C T A G C T G A T C G A C T G A C T A G C A G T C T A G C G T A C T G A C G T A T C A G A C G T C T A G C T G A

PB0166.1_Sox12_2/Jaspar

Match Rank:3
Score:0.53
Offset:1
Orientation:forward strand
Alignment:TGCACAGAGAAAGAGM-
-AAACAGACAAAGGAAT
 A C G T A C T G A G T C C G T A A T G C C T G A A C T G C G T A A C T G C G T A G T C A C G T A A C T G C G T A A C T G G T A C A C G T
A C G T T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.53
Offset:5
Orientation:forward strand
Alignment:TGCACAGAGAAAGAGM
-----AGAGGAAGTG-
 A C G T A C T G A G T C C G T A A T G C C T G A A C T G C G T A A C T G C G T A G T C A C G T A A C T G C G T A A C T G G T A C
A C G T A C G T A C G T A C G T A C G T C G T A T A C G T C G A A C T G A C T G C G T A C G T A T A C G A G C T T A C G A C G T

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.52
Offset:6
Orientation:forward strand
Alignment:TGCACAGAGAAAGAGM
------GAGSCCGAGC
 A C G T A C T G A G T C C G T A A T G C C T G A A C T G C G T A A C T G C G T A G T C A C G T A A C T G C G T A A C T G G T A C
A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C T G A T G C T G A C G A T C A T C G T G C A A C T G A G T C

IRF:BATF(IRF:bZIP)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:6
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--TGCACAGAGAAAGAGM
BAGTCATANTGAAAG---
 A C G T A C G T A C G T A C T G A G T C C G T A A T G C C T G A A C T G C G T A A C T G C G T A G T C A C G T A A C T G C G T A A C T G G T A C
A C T G C G T A A T C G C G A T T G A C C G T A C G A T G C T A G T C A C G A T T C A G C T G A C T G A C T G A T A C G A C G T A C G T A C G T

PB0104.1_Zscan4_1/Jaspar

Match Rank:7
Score:0.51
Offset:-6
Orientation:forward strand
Alignment:------TGCACAGAGAAAGAGM
TACATGTGCACATAAAA-----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G T A A T G C C T G A A C T G C G T A A C T G C G T A G T C A C G T A A C T G C G T A A C T G G T A C
C A G T G T C A T G A C C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A A G C T G C T A G C T A C G T A G T C A A C G T A C G T A C G T A C G T A C G T

Gata1/MA0035.3/Jaspar

Match Rank:8
Score:0.50
Offset:3
Orientation:reverse strand
Alignment:TGCACAGAGAAAGAGM
---ANAGATAAGAA--
 A C G T A C T G A G T C C G T A A T G C C T G A A C T G C G T A A C T G C G T A G T C A C G T A A C T G C G T A A C T G G T A C
A C G T A C G T A C G T C T G A T A G C C G T A A C T G C G T A A C G T C G T A C T G A T C A G T C G A T C G A A C G T A C G T

bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer

Match Rank:9
Score:0.49
Offset:-3
Orientation:reverse strand
Alignment:---TGCACAGAGAAAGAGM
WNAGTCADAVTGAAACTN-
 A C G T A C G T A C G T A C G T A C T G A G T C C G T A A T G C C T G A A C T G C G T A A C T G C G T A G T C A C G T A A C T G C G T A A C T G G T A C
G C A T T A C G C G T A A T C G G C A T T A G C G C T A C G T A G C T A T G C A C G A T T C A G C T G A T C G A T C G A T A G C G A C T T C A G A C G T

IRF1/MA0050.2/Jaspar

Match Rank:10
Score:0.49
Offset:3
Orientation:reverse strand
Alignment:TGCACAGAGAAAGAGM--------
---AAANNGAAAGTGAAAGTAAAN
 A C G T A C T G A G T C C G T A A T G C C T G A A C T G C G T A A C T G C G T A G T C A C G T A A C T G C G T A A C T G G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T G A C G T A C T G A T C A G G C A T T C A G C T G A C T G A C G T A T A C G G A C T C T A G T C G A C T G A C G T A T A C G G A C T T C G A T C G A C T G A C T G A