Information for 17-TGCCAGTAGGHAA (Motif 27)

A C G T A T C G T G A C A G T C C G T A A C T G A C G T C G T A A C T G A C T G G A T C C G T A C G T A
Reverse Opposite:
A C G T A C G T C A T G A G T C A G T C C G A T T G C A A G T C A C G T A C T G A C T G A T G C C G T A
p-value:1e-8
log p-value:-2.019e+01
Information Content per bp:1.846
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.86%
Number of Background Sequences with motif7.4
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets47.8 +/- 17.0bp
Average Position of motif in Background68.7 +/- 14.9bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0205.1_Zic1_2/Jaspar

Match Rank:1
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--TGCCAGTAGGHAA
CCACACAGCAGGAGA
 A C G T A C G T A C G T A T C G T G A C A G T C C G T A A C T G A C G T C G T A A C T G A C T G G A T C C G T A C G T A
A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

Myb/MA0100.2/Jaspar

Match Rank:2
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TGCCAGTAGGHAA
TGGCAGTTGN---
 A C G T A T C G T G A C A G T C C G T A A C T G A C G T C G T A A C T G A C T G G A T C C G T A C G T A
C G A T A C T G C T A G A G T C C G T A A C T G A G C T A C G T C T A G T C A G A C G T A C G T A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:3
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--TGCCAGTAGGHAA
CCACACAGCAGGAGA
 A C G T A C G T A C G T A T C G T G A C A G T C C G T A A C T G A C G T C G T A A C T G A C T G G A T C C G T A C G T A
G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

PB0149.1_Myb_2/Jaspar

Match Rank:4
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---TGCCAGTAGGHAA
NNNTGGCAGTTGGTNN
 A C G T A C G T A C G T A C G T A T C G T G A C A G T C C G T A A C T G A C G T C G T A A C T G A C T G G A T C C G T A C G T A
C T A G T A G C T C G A G A C T C T A G C T A G A G T C C T G A A C T G A C G T G A C T C T A G T C A G C A G T G T A C T A C G

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:5
Score:0.62
Offset:0
Orientation:forward strand
Alignment:TGCCAGTAGGHAA
TGGCAGTTGG---
 A C G T A T C G T G A C A G T C C G T A A C T G A C G T C G T A A C T G A C T G G A T C C G T A C G T A
G A C T C T A G C T A G A G T C T G C A A C T G A C G T A C G T C T A G T C A G A C G T A C G T A C G T

PKNOX2/MA0783.1/Jaspar

Match Rank:6
Score:0.62
Offset:0
Orientation:forward strand
Alignment:TGCCAGTAGGHAA
TGACAGGTGTCA-
 A C G T A T C G T G A C A G T C C G T A A C T G A C G T C G T A A C T G A C T G G A T C C G T A C G T A
C G A T T A C G C T G A A G T C C G T A C A T G T A C G A G C T T C A G G A C T T G A C C T G A A C G T

PKNOX1/MA0782.1/Jaspar

Match Rank:7
Score:0.61
Offset:0
Orientation:forward strand
Alignment:TGCCAGTAGGHAA
TGACAGGTGTCA-
 A C G T A T C G T G A C A G T C C G T A A C T G A C G T C G T A A C T G A C T G G A T C C G T A C G T A
G A C T T A C G C T G A G T A C C T G A C A T G T A C G A G C T T C A G G C A T T A G C C G T A A C G T

PB0150.1_Mybl1_2/Jaspar

Match Rank:8
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--TGCCAGTAGGHAA
CACGGCAGTTGGTNN
 A C G T A C G T A C G T A T C G T G A C A G T C C G T A A C T G A C G T C G T A A C T G A C T G G A T C C G T A C G T A
T G A C C G T A A G T C C A T G C T A G A G T C T C G A A C T G A C G T C A G T C T A G C T A G A C G T T A G C T A C G

PB0207.1_Zic3_2/Jaspar

Match Rank:9
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--TGCCAGTAGGHAA
GAGCACAGCAGGACA
 A C G T A C G T A C G T A T C G T G A C A G T C C G T A A C T G A C G T C G T A A C T G A C T G G A T C C G T A C G T A
C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A

TGIF2/MA0797.1/Jaspar

Match Rank:10
Score:0.60
Offset:0
Orientation:forward strand
Alignment:TGCCAGTAGGHAA
TGACAGCTGTCA-
 A C G T A T C G T G A C A G T C C G T A A C T G A C G T C G T A A C T G A C T G G A T C C G T A C G T A
G C A T C T A G C T G A G A T C C T G A C A T G T A G C G A C T C T A G G A C T A T G C C G T A A C G T