Information for 10-TTGGAAATTG (Motif 25)

A C G T C G A T C T A G C T A G C T G A T G C A C G T A A C G T C G A T C T A G
Reverse Opposite:
A G T C C G T A T G C A C G A T A C G T A G C T G A T C G A T C G C T A T G C A
p-value:1e-9
log p-value:-2.203e+01
Information Content per bp:1.816
Number of Target Sequences with motif33.0
Percentage of Target Sequences with motif4.71%
Number of Background Sequences with motif589.8
Percentage of Background Sequences with motif1.27%
Average Position of motif in Targets49.4 +/- 26.9bp
Average Position of motif in Background51.0 +/- 32.6bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFATC1/MA0624.1/Jaspar

Match Rank:1
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-TTGGAAATTG
NNTGGAAANN-
 A C G T A C G T C G A T C T A G C T A G C T G A T G C A C G T A A C G T C G A T C T A G
C G T A C T G A G A C T C T A G A C T G C T G A C T G A G C T A C G T A G C A T A C G T

NFATC3/MA0625.1/Jaspar

Match Rank:2
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-TTGGAAATTG
AATGGAAAAT-
 A C G T A C G T C G A T C T A G C T A G C T G A T G C A C G T A A C G T C G A T C T A G
C G T A C T G A G A C T T A C G C A T G T C G A C G T A G C T A C T G A G C A T A C G T

NFAT5/MA0606.1/Jaspar

Match Rank:3
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-TTGGAAATTG
NATGGAAAAN-
 A C G T A C G T C G A T C T A G C T A G C T G A T G C A C G T A A C G T C G A T C T A G
G C T A C T G A C G A T T C A G C T A G C G T A C G T A C G T A C G T A A C G T A C G T

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:4
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-TTGGAAATTG
AATGGAAAAT-
 A C G T A C G T C G A T C T A G C T A G C T G A T G C A C G T A A C G T C G A T C T A G
T C G A T C G A A G C T A C T G A C T G C G T A C G T A G T C A T G C A G C A T A C G T

NFATC2/MA0152.1/Jaspar

Match Rank:5
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:TTGGAAATTG
-TGGAAAA--
 A C G T C G A T C T A G C T A G C T G A T G C A C G T A A C G T C G A T C T A G
A C G T C G A T A C T G A C T G C G T A C G T A T C G A G C T A A C G T A C G T

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:6
Score:0.66
Offset:2
Orientation:forward strand
Alignment:TTGGAAATTG--
--GGAAATTCCC
 A C G T C G A T C T A G C T A G C T G A T G C A C G T A A C G T C G A T C T A G A C G T A C G T
A C G T A C G T A C T G C A T G G C T A T C G A G C T A A G C T A G C T G T A C A G T C T G A C

PB0165.1_Sox11_2/Jaspar

Match Rank:7
Score:0.64
Offset:3
Orientation:forward strand
Alignment:TTGGAAATTG-------
---AAAATTGTTATGAA
 A C G T C G A T C T A G C T A G C T G A T G C A C G T A A C G T C G A T C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G T A C T G A C T G A C T G A A C G T G A C T T C A G C G A T G A C T G C T A C A G T T C A G C T G A C G T A

PB0115.1_Ehf_2/Jaspar

Match Rank:8
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----TTGGAAATTG--
AAGATCGGAANTNNNA
 A C G T A C G T A C G T A C G T A C G T C G A T C T A G C T A G C T G A T G C A C G T A A C G T C G A T C T A G A C G T A C G T
C G T A G C T A A T C G C G T A C G A T T G A C C A T G C T A G C G T A C G T A T G C A G A C T G T C A A G T C G C A T G C T A

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:9
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TTGGAAATTG
TTTGAAACCG
 A C G T C G A T C T A G C T A G C T G A T G C A C G T A A C G T C G A T C T A G
A C G T A C G T A C G T T A C G C G T A C T G A C G T A G T A C A G T C A T C G

RELA/MA0107.1/Jaspar

Match Rank:10
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:TTGGAAATTG--
--GGAAATTCCC
 A C G T C G A T C T A G C T A G C T G A T G C A C G T A A C G T C G A T C T A G A C G T A C G T
A C G T A C G T A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C