Information for 16-RTGCAATATCATSAAA (Motif 24)

T C A G A C G T A T C G G T A C C G T A G T C A C A G T T G C A A C G T T G A C C G T A C G A T A T G C C G T A C G T A C G T A
Reverse Opposite:
G C A T C G A T A C G T T A C G C G T A C G A T A C T G T G C A A C G T G T C A C A G T A C G T A C T G A T G C T C G A A G T C
p-value:1e-9
log p-value:-2.219e+01
Information Content per bp:1.764
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.86%
Number of Background Sequences with motif5.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets55.0 +/- 25.7bp
Average Position of motif in Background30.8 +/- 2.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CEBP:CEBP(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:1
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---RTGCAATATCATSAAA-
NTNATGCAAYMNNHTGMAAY
 A C G T A C G T A C G T T C A G A C G T A T C G G T A C C G T A G T C A C A G T T G C A A C G T T G A C C G T A C G A T A T G C C G T A C G T A C G T A A C G T
T G C A G C A T C G A T C G T A C A G T A C T G G T A C C G T A C T G A A G C T G T C A A C T G C T A G G T C A C G A T A C T G G T A C T G C A C G T A A G C T

Ddit3::Cebpa/MA0019.1/Jaspar

Match Rank:2
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--RTGCAATATCATSAAA
AGATGCAATCCC------
 A C G T A C G T T C A G A C G T A T C G G T A C C G T A G T C A C A G T T G C A A C G T T G A C C G T A C G A T A T G C C G T A C G T A C G T A
T C G A C T A G C T G A A G C T A C T G G T A C G T C A T G C A A G C T T G A C T A G C A G T C A C G T A C G T A C G T A C G T A C G T A C G T

PB0169.1_Sox15_2/Jaspar

Match Rank:3
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:RTGCAATATCATSAAA
-TNGAATTTCATTNAN
 T C A G A C G T A T C G G T A C C G T A G T C A C A G T T G C A A C G T T G A C C G T A C G A T A T G C C G T A C G T A C G T A
A C G T A G C T A T G C C T A G C T G A G T C A G A C T C A G T G C A T T G A C C T G A C A G T G A C T A G T C T G C A T G C A

PB0129.1_Glis2_2/Jaspar

Match Rank:4
Score:0.57
Offset:4
Orientation:forward strand
Alignment:RTGCAATATCATSAAA--
----AATATTAATAAAGA
 T C A G A C G T A T C G G T A C C G T A G T C A C A G T T G C A A C G T T G A C C G T A C G A T A T G C C G T A C G T A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T G C T A C G T A A C G T C T G A C G A T C A G T C T G A G C T A G C A T G C T A C G T A G T C A C T A G T C G A

Arid3a/MA0151.1/Jaspar

Match Rank:5
Score:0.55
Offset:10
Orientation:forward strand
Alignment:RTGCAATATCATSAAA
----------ATTAAA
 T C A G A C G T A T C G G T A C C G T A G T C A C A G T T G C A A C G T T G A C C G T A C G A T A T G C C G T A C G T A C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T G A C T C G T A C G T A C G T A

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:6
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:RTGCAATATCATSAAA
-----ATTGCATCAK-
 T C A G A C G T A T C G G T A C C G T A G T C A C A G T T G C A A C G T T G A C C G T A C G A T A T G C C G T A C G T A C G T A
A C G T A C G T A C G T A C G T A C G T T C G A A C G T A C G T C T A G A G T C T C G A G C A T G T A C C T G A A C G T A C G T

Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:7
Score:0.54
Offset:5
Orientation:forward strand
Alignment:RTGCAATATCATSAAA
-----ATTGCATCAT-
 T C A G A C G T A T C G G T A C C G T A G T C A C A G T T G C A A C G T T G A C C G T A C G A T A T G C C G T A C G T A C G T A
A C G T A C G T A C G T A C G T A C G T T C G A G C A T A C G T C T A G G T A C T C G A G C A T T G A C T C G A A C G T A C G T

Pax7(Paired,Homeobox),long/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:8
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:RTGCAATATCATSAAA
--GTAATCDGATTA--
 T C A G A C G T A T C G G T A C C G T A G T C A C A G T T G C A A C G T T G A C C G T A C G A T A T G C C G T A C G T A C G T A
A C G T A C G T C A T G C G A T T C G A C T G A G C A T A G T C C A T G T C A G C T G A A C G T G A C T C G T A A C G T A C G T

OCT:OCT(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:9
Score:0.53
Offset:0
Orientation:forward strand
Alignment:RTGCAATATCATSAAA
ATGAATATTCATGAG-
 T C A G A C G T A T C G G T A C C G T A G T C A C A G T T G C A A C G T T G A C C G T A C G A T A T G C C G T A C G T A C G T A
G C T A A C G T C T A G G T C A C G T A A C G T C G T A C G A T C A G T A G T C C G T A A C G T C T A G C T G A A T C G A C G T

Prop1(Homeobox)/GHFT1-PROP1.biotin-ChIP-Seq(GSE77302)/Homer

Match Rank:10
Score:0.53
Offset:2
Orientation:forward strand
Alignment:RTGCAATATCATSAAA
--NTAATBNAATTA--
 T C A G A C G T A T C G G T A C C G T A G T C A C A G T T G C A A C G T T G A C C G T A C G A T A T G C C G T A C G T A C G T A
A C G T A C G T G T A C G C A T C T G A C G T A G A C T A G C T C A T G T G C A C T G A A C G T G A C T C G T A A C G T A C G T