Information for 9-ATCCAACATA (Motif 23)

G C T A C A G T G T A C G T A C G C T A C T G A T A G C G T C A G C A T T G C A
Reverse Opposite:
A C G T C G T A C A G T A T C G G A C T C G A T C A T G A C T G G T C A C G A T
p-value:1e-9
log p-value:-2.237e+01
Information Content per bp:1.675
Number of Target Sequences with motif39.0
Percentage of Target Sequences with motif5.57%
Number of Background Sequences with motif784.5
Percentage of Background Sequences with motif1.69%
Average Position of motif in Targets48.6 +/- 28.0bp
Average Position of motif in Background51.1 +/- 29.2bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer

Match Rank:1
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---ATCCAACATA
GYCATCMATCAT-
 A C G T A C G T A C G T G C T A C A G T G T A C G T A C G C T A C T G A T A G C G T C A G C A T T G C A
T A C G G A C T T G A C C G T A A C G T G A T C G T C A C G T A A C G T A T G C C G T A G A C T A C G T

Foxd3/MA0041.1/Jaspar

Match Rank:2
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-ATCCAACATA-
AAACAAACATTC
 A C G T G C T A C A G T G T A C G T A C G C T A C T G A T A G C G T C A G C A T T G C A A C G T
C T G A T G C A C T G A G A T C G T C A C G T A C G T A G A T C C T G A C G A T C G A T G A T C

NFIC/MA0161.1/Jaspar

Match Rank:3
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:ATCCAACATA
TGCCAA----
 G C T A C A G T G T A C G T A C G C T A C T G A T A G C G T C A G C A T T G C A
G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T A C G T

PBX1/MA0070.1/Jaspar

Match Rank:4
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--ATCCAACATA
CCATCAATCAAA
 A C G T A C G T G C T A C A G T G T A C G T A C G C T A C T G A T A G C G T C A G C A T T G C A
G A T C A G T C T C G A G A C T A G T C G T C A C G T A A C G T A G T C G C T A C G T A C G T A

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:5
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:ATCCAACATA
TTGCAACATN
 G C T A C A G T G T A C G T A C G C T A C T G A T A G C G T C A G C A T T G C A
C A G T A C G T C T A G A G T C G T C A C G T A G A T C G C T A A G C T G A T C

OLIG1/MA0826.1/Jaspar

Match Rank:6
Score:0.57
Offset:4
Orientation:forward strand
Alignment:ATCCAACATA----
----AACATATGTT
 G C T A C A G T G T A C G T A C G C T A C T G A T A G C G T C A G C A T T G C A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C G A T G C A G T A C C T G A A C G T T G C A G C A T A C T G A C G T G A C T

PH0057.1_Hoxb13/Jaspar

Match Rank:7
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-ATCCAACATA-----
AACCCAATAAAATTCG
 A C G T G C T A C A G T G T A C G T A C G C T A C T G A T A G C G T C A G C A T T G C A A C G T A C G T A C G T A C G T A C G T
T G C A C T G A G T A C A G T C G A T C G C T A C T G A A G C T C G T A C G T A G C T A T G C A G C A T G C A T G A T C T A C G

RHOXF1/MA0719.1/Jaspar

Match Rank:8
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---ATCCAACATA
ATAATCCC-----
 A C G T A C G T A C G T G C T A C A G T G T A C G T A C G C T A C T G A T A G C G T C A G C A T T G C A
G C T A C G A T C T G A C G T A A C G T A G T C A G T C G T A C A C G T A C G T A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:9
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--ATCCAACATA
CGTGCCAAG---
 A C G T A C G T G C T A C A G T G T A C G T A C G C T A C T G A T A G C G T C A G C A T T G C A
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T

PH0134.1_Pbx1/Jaspar

Match Rank:10
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--ATCCAACATA-----
TCACCCATCAATAAACA
 A C G T A C G T G C T A C A G T G T A C G T A C G C T A C T G A T A G C G T C A G C A T T G C A A C G T A C G T A C G T A C G T A C G T
G A C T A G T C C G T A G A T C G T A C T G A C C T G A C G A T G T A C G T C A G C T A C G A T G T A C G C T A C G A T T G A C T G C A