Information for 11-CTAGYCMAARTARMCM (Motif 17)

G T A C C G A T C T G A A C T G A G T C A G T C G T C A C G T A C G T A C T G A A C G T C G T A C T G A G T C A A G T C G T C A
Reverse Opposite:
A C G T A C T G A C G T A G C T A C G T C G T A A G C T A C G T A C G T A C G T A C T G C T A G A G T C A G C T C G T A A C T G
p-value:1e-11
log p-value:-2.580e+01
Information Content per bp:1.844
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.71%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets49.6 +/- 28.2bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:CTAGYCMAARTARMCM--
--TGCCAAAATAAACANN
 G T A C C G A T C T G A A C T G A G T C A G T C G T C A C G T A C G T A C T G A A C G T C G T A C T G A G T C A A G T C G T C A A C G T A C G T
A C G T A C G T C G A T A C T G T A G C G T A C C G T A C T G A C T G A C T G A G A C T G T C A G T C A C T G A A G T C C G T A C T G A G C T A

MF0005.1_Forkhead_class/Jaspar

Match Rank:2
Score:0.58
Offset:7
Orientation:reverse strand
Alignment:CTAGYCMAARTARMCM
-------AAATAAACA
 G T A C C G A T C T G A A C T G A G T C A G T C G T C A C G T A C G T A C T G A A C G T C G T A C T G A G T C A A G T C G T C A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A G T C A T C G A G A C T G T C A C T G A T C G A G A T C C G T A

Foxa2/MA0047.2/Jaspar

Match Rank:3
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:CTAGYCMAARTARMCM
----NCTAAGTAAACA
 G T A C C G A T C T G A A C T G A G T C A G T C G T C A C G T A C G T A C T G A A C G T C G T A C T G A G T C A A G T C G T C A
A C G T A C G T A C G T A C G T T A G C G T A C G C A T T C G A C G T A C T A G A G C T G T C A T G C A C G T A A G T C C G T A

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:4
Score:0.56
Offset:6
Orientation:forward strand
Alignment:CTAGYCMAARTARMCM
------AAAGTAAACA
 G T A C C G A T C T G A A C T G A G T C A G T C G T C A C G T A C G T A C T G A A C G T C G T A C T G A G T C A A G T C G T C A
A C G T A C G T A C G T A C G T A C G T A C G T G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:5
Score:0.56
Offset:6
Orientation:forward strand
Alignment:CTAGYCMAARTARMCM
------AAAGTAAACA
 G T A C C G A T C T G A A C T G A G T C A G T C G T C A C G T A C G T A C T G A A C G T C G T A C T G A G T C A A G T C G T C A
A C G T A C G T A C G T A C G T A C G T A C G T G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A

FOXP2/MA0593.1/Jaspar

Match Rank:6
Score:0.55
Offset:7
Orientation:forward strand
Alignment:CTAGYCMAARTARMCM--
-------AAGTAAACAAA
 G T A C C G A T C T G A A C T G A G T C A G T C G T C A C G T A C G T A C T G A A C G T C G T A C T G A G T C A A G T C G T C A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A C G T A C T A G C G A T C G T A C G T A C G T A A G T C C G T A T C G A C T G A

FOXA1/MA0148.3/Jaspar

Match Rank:7
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:CTAGYCMAARTARMCM----
-----CAAAGTAAACANNNN
 G T A C C G A T C T G A A C T G A G T C A G T C G T C A C G T A C G T A C T G A A C G T C G T A C T G A G T C A A G T C G T C A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G T A C G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C G C T A C G A T T A C G T C A G C T G A

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.54
Offset:2
Orientation:forward strand
Alignment:CTAGYCMAARTARMCM
--DCYAAAAATAGM--
 G T A C C G A T C T G A A C T G A G T C A G T C G T C A C G T A C G T A C T G A A C G T C G T A C T G A G T C A A G T C G T C A
A C G T A C G T C A T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G A C T C T G A T C A G G T A C A C G T A C G T

FOXF2/MA0030.1/Jaspar

Match Rank:9
Score:0.54
Offset:4
Orientation:forward strand
Alignment:CTAGYCMAARTARMCM--
----CAAACGTAAACAAT
 G T A C C G A T C T G A A C T G A G T C A G T C G T C A C G T A C G T A C T G A A C G T C G T A C T G A G T C A A G T C G T C A A C G T A C G T
A C G T A C G T A C G T A C G T A G T C G T C A G C T A C G T A T A G C C T A G A C G T C G T A C G T A C G T A A G T C C G T A G C T A C G A T

FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer

Match Rank:10
Score:0.53
Offset:6
Orientation:forward strand
Alignment:CTAGYCMAARTARMCM--
------WWTRTAAACAVG
 G T A C C G A T C T G A A C T G A G T C A G T C G T C A C G T A C G T A C T G A A C G T C G T A C T G A G T C A A G T C G T C A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G T A G C T A C G A T C T A G A C G T G T C A C G T A C G T A A G T C C G T A T G C A T A C G