Information for 12-RGAGMTKAWAACT (Motif 28)

C T A G A C T G C G T A A C T G G T A C A C G T A C G T C G T A C G T A C G T A C G T A A G T C A C G T
Reverse Opposite:
C G T A C T A G A C G T A C G T C G A T A C G T G T C A C G T A A C T G A G T C A C G T A G T C G A T C
p-value:1e-8
log p-value:-2.002e+01
Information Content per bp:1.873
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.67%
Number of Background Sequences with motif3.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets43.2 +/- 28.9bp
Average Position of motif in Background26.5 +/- 15.7bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GATA(Zf),IR3/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:1
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-RGAGMTKAWAACT------
NDBAGATRWTATCTVNNNNN
 A C G T C T A G A C T G C G T A A C T G G T A C A C G T A C G T C G T A C G T A C G T A C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G T A C A G T A T G C C G T A A C T G C G T A A C G T T C G A G C T A G A C T C G T A A C G T A G T C C G A T T A C G G C A T A G C T G A T C G A C T G A C T

PH0137.1_Pitx1/Jaspar

Match Rank:2
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----RGAGMTKAWAACT
TTAGAGGGATTAACAAT
 A C G T A C G T A C G T A C G T C T A G A C T G C G T A A C T G G T A C A C G T A C G T C G T A C G T A C G T A C G T A A G T C A C G T
G A C T A C G T T C G A C T A G C T G A T C A G C T A G C A T G G T C A A C G T G A C T C G T A C T G A G T A C C T G A G T C A G C A T

PH0122.1_Obox2/Jaspar

Match Rank:3
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----RGAGMTKAWAACT
TGAGGGGGATTAACTAT
 A C G T A C G T A C G T A C G T C T A G A C T G C G T A A C T G G T A C A C G T A C G T C G T A C G T A C G T A C G T A A G T C A C G T
C G A T A C T G T C G A C T A G C T A G C T A G C T A G C A T G G T C A C A G T G C A T C G T A C G T A G T A C C G A T G T C A G A C T

PH0124.1_Obox5_1/Jaspar

Match Rank:4
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---RGAGMTKAWAACT-
TAGAGGGATTAAATTTC
 A C G T A C G T A C G T C T A G A C T G C G T A A C T G G T A C A C G T A C G T C G T A C G T A C G T A C G T A A G T C A C G T A C G T
G C A T C T G A T C A G T C G A T C A G C T A G C A T G C G T A A C G T C G A T C G T A C G T A G C T A G A C T A G C T G C A T G T A C

PB0021.1_Gata3_1/Jaspar

Match Rank:5
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----RGAGMTKAWAACT----
TTTTTAGAGATAAGAAATAAAG
 A C G T A C G T A C G T A C G T A C G T C T A G A C T G C G T A A C T G G T A C A C G T A C G T C G T A C G T A C G T A C G T A A G T C A C G T A C G T A C G T A C G T A C G T
A C G T C A G T G C A T C A G T C G A T C T G A C A T G G C T A A C T G C G T A C G A T G C T A C G T A T A C G T G C A C T G A G C T A A C G T C G T A G T C A T C G A C A T G

GATA2/MA0036.2/Jaspar

Match Rank:6
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:RGAGMTKAWAACT-
NCAGATAAGAANNN
 C T A G A C T G C G T A A C T G G T A C A C G T A C G T C G T A C G T A C G T A C G T A A G T C A C G T A C G T
C G T A T A G C C G T A A C T G C G T A A C G T C G T A C T G A T A C G T C G A C G T A G A C T G A T C G C A T

PH0017.1_Cux1_2/Jaspar

Match Rank:7
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-RGAGMTKAWAACT-
TAATGATGATCACTA
 A C G T C T A G A C T G C G T A A C T G G T A C A C G T A C G T C G T A C G T A C G T A C G T A A G T C A C G T A C G T
C G A T T G C A T C G A A G C T C A T G G C T A C G A T C T A G C G T A C A G T G A T C T C G A G T A C C G A T C G T A

PU.1:IRF8(ETS:IRF)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:8
Score:0.53
Offset:0
Orientation:forward strand
Alignment:RGAGMTKAWAACT
GGAAGTGAAAST-
 C T A G A C T G C G T A A C T G G T A C A C G T A C G T C G T A C G T A C G T A C G T A A G T C A C G T
C T A G C T A G C G T A C G T A T A C G C G A T C T A G C T G A C T G A C G T A T A C G G A C T A C G T

Gata1/MA0035.3/Jaspar

Match Rank:9
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:RGAGMTKAWAACT
ANAGATAAGAA--
 C T A G A C T G C G T A A C T G G T A C A C G T A C G T C G T A C G T A C G T A C G T A A G T C A C G T
C T G A T A G C C G T A A C T G C G T A A C G T C G T A C T G A T C A G T C G A T C G A A C G T A C G T

PH0123.1_Obox3/Jaspar

Match Rank:10
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----RGAGMTKAWAACT
TGAGGGGGATTAACTAT
 A C G T A C G T A C G T A C G T C T A G A C T G C G T A A C T G G T A C A C G T A C G T C G T A C G T A C G T A C G T A A G T C A C G T
G C A T A T C G T C G A T A C G C T A G C T A G C T A G C A T G G C T A A C G T G A C T C G T A C G T A G T A C C G A T G T C A G A C T