Information for 11-CTAMACAAWGGAG (Motif 26)

A G T C G C A T G C T A T G A C T G C A A T G C C G T A C G T A C G A T A C T G C A T G C G T A A C T G
Reverse Opposite:
A G T C C G A T G A T C A G T C C G T A A C G T A C G T T A C G A C G T A C T G C G A T C G T A T A C G
p-value:1e-8
log p-value:-2.071e+01
Information Content per bp:1.727
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.61%
Number of Background Sequences with motif64.6
Percentage of Background Sequences with motif0.14%
Average Position of motif in Targets51.3 +/- 29.5bp
Average Position of motif in Background41.9 +/- 26.6bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox2/MA0143.3/Jaspar

Match Rank:1
Score:0.75
Offset:3
Orientation:reverse strand
Alignment:CTAMACAAWGGAG
---AACAAAGG--
 A G T C G C A T G C T A T G A C T G C A A T G C C G T A C G T A C G A T A C T G C A T G C G T A A C T G
A C G T A C G T A C G T T C G A C G T A A G T C C G T A C G T A C G T A A C T G A C T G A C G T A C G T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:2
Score:0.74
Offset:3
Orientation:reverse strand
Alignment:CTAMACAAWGGAG
---RACAAWGG--
 A G T C G C A T G C T A T G A C T G C A A T G C C G T A C G T A C G A T A C T G C A T G C G T A A C T G
A C G T A C G T A C G T T C G A G T C A T G A C C G T A C G T A C G T A C T A G T A C G A C G T A C G T

PB0168.1_Sox14_2/Jaspar

Match Rank:3
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-CTAMACAAWGGAG-
CTCACACAATGGCGC
 A C G T A G T C G C A T G C T A T G A C T G C A A T G C C G T A C G T A C G A T A C T G C A T G C G T A A C T G A C G T
A G T C A C G T A G T C T C G A T A G C C G T A A T G C G T C A G T C A G C A T C T A G T C A G G T A C A C T G A T G C

PB0166.1_Sox12_2/Jaspar

Match Rank:4
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--CTAMACAAWGGAG-
AAACAGACAAAGGAAT
 A C G T A C G T A G T C G C A T G C T A T G A C T G C A A T G C C G T A C G T A C G A T A C T G C A T G C G T A A C T G A C G T
T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:5
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:CTAMACAAWGGAG
-VRRACAAWGG--
 A G T C G C A T G C T A T G A C T G C A A T G C C G T A C G T A C G A T A C T G C A T G C G T A A C T G
A C G T T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G A C G T A C G T

SOX10/MA0442.1/Jaspar

Match Rank:6
Score:0.69
Offset:4
Orientation:reverse strand
Alignment:CTAMACAAWGGAG
----ACAAAG---
 A G T C G C A T G C T A T G A C T G C A A T G C C G T A C G T A C G A T A C T G C A T G C G T A A C T G
A C G T A C G T A C G T A C G T G T C A A T G C C G T A T G C A C G T A C T A G A C G T A C G T A C G T

PB0132.1_Hbp1_2/Jaspar

Match Rank:7
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-CTAMACAAWGGAG---
NNTNNACAATGGGANNN
 A C G T A G T C G C A T G C T A T G A C T G C A A T G C C G T A C G T A C G A T A C T G C A T G C G T A A C T G A C G T A C G T A C G T
C G T A T A C G A G C T C G T A A G T C G T C A G T A C C G T A C G T A C G A T C T A G C T A G A C T G T C G A G T C A G A T C G C T A

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:8
Score:0.69
Offset:2
Orientation:forward strand
Alignment:CTAMACAAWGGAG
--RAACAATGGN-
 A G T C G C A T G C T A T G A C T G C A A T G C C G T A C G T A C G A T A C T G C A T G C G T A A C T G
A C G T A C G T C T G A T C G A C G T A A T G C C G T A C G T A C G A T C T A G T C A G G A T C A C G T

PB0061.1_Sox11_1/Jaspar

Match Rank:9
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--CTAMACAAWGGAG--
ATAAGAACAAAGGACTA
 A C G T A C G T A G T C G C A T G C T A T G A C T G C A A T G C C G T A C G T A C G A T A C T G C A T G C G T A A C T G A C G T A C G T
G C T A A C G T C G T A C G T A C T A G T C G A C G T A A G T C C G T A G T C A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:10
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:CTAMACAAWGGAG
-VRAACAATGG--
 A G T C G C A T G C T A T G A C T G C A A T G C C G T A C G T A C G A T A C T G C A T G C G T A A C T G
A C G T T G A C C T G A T C G A C G T A T A G C G T C A T C G A G C A T C T A G T A C G A C G T A C G T