Information for 6-TGACAGACAGACC (Motif 7)

A C G T A C T G C G T A A G T C C G T A A C T G C G T A G T A C C G T A A T C G C G T A A G T C T A G C
Reverse Opposite:
A T C G T A C G C G A T A T G C A C G T A C T G A C G T A G T C C G A T A C T G A C G T A G T C G T C A
p-value:1e-13
log p-value:-3.151e+01
Information Content per bp:1.820
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.83%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets58.4 +/- 23.0bp
Average Position of motif in Background36.2 +/- 0.4bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:1
Score:0.77
Offset:0
Orientation:reverse strand
Alignment:TGACAGACAGACC
TGAGTGACAGSC-
 A C G T A C T G C G T A A G T C C G T A A C T G C G T A G T A C C G T A A T C G C G T A A G T C T A G C
C G A T A T C G T C G A A C T G C G A T A T C G C T G A A G T C C G T A A T C G T A C G G A T C A C G T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.76
Offset:-1
Orientation:reverse strand
Alignment:-TGACAGACAGACC
NTGATTGACAGN--
 A C G T A C G T A C T G C G T A A G T C C G T A A C T G C G T A G T A C C G T A A T C G C G T A A G T C T A G C
A C G T C G A T A T C G C G T A A C G T C A G T A C T G C T G A A G T C C T G A A T C G A T C G A C G T A C G T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:3
Score:0.75
Offset:-3
Orientation:reverse strand
Alignment:---TGACAGACAGACC
AGGTGNCAGACAG---
 A C G T A C G T A C G T A C G T A C T G C G T A A G T C C G T A A C T G C G T A G T A C C G T A A T C G C G T A A G T C T A G C
C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G A C G T A C G T A C G T

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:4
Score:0.75
Offset:-1
Orientation:reverse strand
Alignment:-TGACAGACAGACC
BTGABTGACAGS--
 A C G T A C G T A C T G C G T A A G T C C G T A A C T G C G T A G T A C C G T A A T C G C G T A A G T C T A G C
A C G T C G A T A C T G C G T A A C G T A C G T A C T G C T G A A G T C C T G A T A C G A T G C A C G T A C G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.74
Offset:-3
Orientation:forward strand
Alignment:---TGACAGACAGACC
AGGTGHCAGACA----
 A C G T A C G T A C G T A C G T A C T G C G T A A G T C C G T A A C T G C G T A G T A C C G T A A T C G C G T A A G T C T A G C
C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A A C G T A C G T A C G T A C G T

MEIS1/MA0498.2/Jaspar

Match Rank:6
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-TGACAGACAGACC
TTGACAG-------
 A C G T A C G T A C T G C G T A A G T C C G T A A C T G C G T A G T A C C G T A A T C G C G T A A G T C T A G C
G C A T G C A T A T C G T G C A A G T C C T G A C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MEIS2/MA0774.1/Jaspar

Match Rank:7
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-TGACAGACAGACC
TTGACAGC------
 A C G T A C G T A C T G C G T A A G T C C G T A A C T G C G T A G T A C C G T A A T C G C G T A A G T C T A G C
C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C A C G T A C G T A C G T A C G T A C G T A C G T

MEIS3/MA0775.1/Jaspar

Match Rank:8
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-TGACAGACAGACC
TTGACAGG------
 A C G T A C G T A C T G C G T A A G T C C G T A A C T G C G T A G T A C C G T A A T C G C G T A A G T C T A G C
C G A T G C A T A T C G C T G A G A T C C T G A A C T G A T C G A C G T A C G T A C G T A C G T A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:TGACAGACAGACC
--CCAGACAG---
 A C G T A C T G C G T A A G T C C G T A A C T G C G T A G T A C C G T A A T C G C G T A A G T C T A G C
A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:TGACAGACAGACC
--CCAGACRSVB-
 A C G T A C T G C G T A A G T C C G T A A C T G C G T A G T A C C G T A A T C G C G T A A G T C T A G C
A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C A C G T