Information for 5-MTTGGCYTTGGTC (Motif 6)

G T A C A C G T A C G T C T A G A C T G A G T C A G C T A C G T A C G T A C T G C T A G A C G T A G T C
Reverse Opposite:
A C T G C G T A A G T C A G T C G T C A C G T A C T G A A C T G A G T C A G T C G T C A C G T A A C T G
p-value:1e-15
log p-value:-3.634e+01
Information Content per bp:1.912
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.83%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets49.9 +/- 26.8bp
Average Position of motif in Background43.5 +/- 13.2bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:1
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:MTTGGCYTTGGTC
BNTGDCCTTG---
 G T A C A C G T A C G T C T A G A C T G A G T C A G C T A C G T A C G T A C T G C T A G A C G T A G T C
A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G A C G T A C G T A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:2
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:MTTGGCYTTGGTC
--TGACCTTGAN-
 G T A C A C G T A C G T C T A G A C T G A G T C A G C T A C G T A C G T A C T G C T A G A C G T A G T C
A C G T A C G T G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:3
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:MTTGGCYTTGGTC
--TGACCTTGAV-
 G T A C A C G T A C G T C T A G A C T G A G T C A G C T A C G T A C G T A C T G C T A G A C G T A G T C
A C G T A C G T G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A A C G T

Nr5a2/MA0505.1/Jaspar

Match Rank:4
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:MTTGGCYTTGGTC--
GCTGACCTTGAACTN
 G T A C A C G T A C G T C T A G A C T G A G T C A G C T A C G T A C G T A C T G C T A G A C G T A G T C A C G T A C G T
T A C G T G A C G C A T T C A G C T G A A G T C A G T C A G C T C A G T A T C G C T G A T C G A G A T C G A C T A G C T

NFIC/MA0161.1/Jaspar

Match Rank:5
Score:0.61
Offset:1
Orientation:forward strand
Alignment:MTTGGCYTTGGTC
-TTGGCA------
 G T A C A C G T A C G T C T A G A C T G A G T C A G C T A C G T A C G T A C T G C T A G A C G T A G T C
A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T A C G T A C G T A C G T A C G T

PB0191.1_Tcfap2c_2/Jaspar

Match Rank:6
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:MTTGGCYTTGGTC--
-NTGCCCTTGGGCGN
 G T A C A C G T A C G T C T A G A C T G A G T C A G C T A C G T A C G T A C T G C T A G A C G T A G T C A C G T A C G T
A C G T G A T C G C A T T C A G G T A C G A T C G A T C C G A T G A C T C T A G C T A G C A T G A G T C C T A G T A C G

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:7
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:MTTGGCYTTGGTC-
--TGACCTTGACCT
 G T A C A C G T A C G T C T A G A C T G A G T C A G C T A C G T A C G T A C T G C T A G A C G T A G T C A C G T
A C G T A C G T G A C T T C A G T G C A A G T C A G T C G A C T A C G T T A C G C G T A G T A C G A T C G A C T

NFIX/MA0671.1/Jaspar

Match Rank:8
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:MTTGGCYTTGGTC
NTTGGCANN----
 G T A C A C G T A C G T C T A G A C T G A G T C A G C T A C G T A C G T A C T G C T A G A C G T A G T C
A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T A C G T A C G T A C G T

NFY(CCAAT)/Promoter/Homer

Match Rank:9
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---MTTGGCYTTGGTC
CCGATTGGCT------
 A C G T A C G T A C G T G T A C A C G T A C G T C T A G A C T G A G T C A G C T A C G T A C G T A C T G C T A G A C G T A G T C
A T G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T A C G T A C G T A C G T A C G T A C G T A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:MTTGGCYTTGGTC
-CTGACCTTTG--
 G T A C A C G T A C G T C T A G A C T G A G T C A G C T A C G T A C G T A C T G C T A G A C G T A G T C
A C G T A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G A C G T A C G T