Information for 16-AGACAGAAGAAAA (Motif 20)

G T C A C T A G C T G A G T A C G C T A C T A G C G T A C G T A C T A G C G T A C G T A G T C A C T G A
Reverse Opposite:
A G C T A C G T C G A T A C G T A G T C C G A T A C G T A G T C C G A T A C T G A G C T A G T C A C G T
p-value:1e-5
log p-value:-1.211e+01
Information Content per bp:1.775
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif1.90%
Number of Background Sequences with motif215.3
Percentage of Background Sequences with motif0.48%
Average Position of motif in Targets51.3 +/- 34.8bp
Average Position of motif in Background47.9 +/- 28.1bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0182.1_Srf_2/Jaspar

Match Rank:1
Score:0.69
Offset:1
Orientation:forward strand
Alignment:AGACAGAAGAAAA-----
-GTTAAAAAAAAAAATTA
 G T C A C T A G C T G A G T A C G C T A C T A G C G T A C G T A C T A G C G T A C G T A G T C A C T G A A C G T A C G T A C G T A C G T A C G T
A C G T T A C G A C G T C G A T C G T A C T G A C T G A T G C A T G C A G T C A G C T A G T C A G T C A G T C A T G C A A C G T G C A T G C A T

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:2
Score:0.68
Offset:0
Orientation:forward strand
Alignment:AGACAGAAGAAAA-
TACTGGAAAAAAAA
 G T C A C T A G C T G A G T A C G C T A C T A G C G T A C G T A C T A G C G T A C G T A G T C A C T G A A C G T
G C A T C T G A T G A C C A G T A C G T T C A G C G T A C G T A T C G A T C G A G C T A G T C A C G T A C T G A

PB0148.1_Mtf1_2/Jaspar

Match Rank:3
Score:0.68
Offset:2
Orientation:forward strand
Alignment:AGACAGAAGAAAA---
--AAATAAGAAAAAAC
 G T C A C T A G C T G A G T A C G C T A C T A G C G T A C G T A C T A G C G T A C G T A G T C A C T G A A C G T A C G T A C G T
A C G T A C G T G C T A C G T A G C T A C A G T G C T A G C T A C A T G G T C A G C T A G C T A G C T A T G C A C G T A T G A C

PB0186.1_Tcf3_2/Jaspar

Match Rank:4
Score:0.61
Offset:0
Orientation:forward strand
Alignment:AGACAGAAGAAAA--
AGCCGAAAAAAAAAT
 G T C A C T A G C T G A G T A C G C T A C T A G C G T A C G T A C T A G C G T A C G T A G T C A C T G A A C G T A C G T
C T G A T A C G A T G C T A G C A C T G C G T A C T G A G C T A G C T A G C T A T G C A G C T A T C G A G C T A G C A T

Sox3/MA0514.1/Jaspar

Match Rank:5
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:AGACAGAAGAAAA-
----AAAACAAAGG
 G T C A C T A G C T G A G T A C G C T A C T A G C G T A C G T A C T A G C G T A C G T A G T C A C T G A A C G T
A C G T A C G T A C G T A C G T T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G

PB0071.1_Sox4_1/Jaspar

Match Rank:6
Score:0.60
Offset:1
Orientation:forward strand
Alignment:AGACAGAAGAAAA-----
-AGAAGAACAAAGGACTA
 G T C A C T A G C T G A G T A C G C T A C T A G C G T A C G T A C T A G C G T A C G T A G T C A C T G A A C G T A C G T A C G T A C G T A C G T
A C G T G T C A A C T G C T G A C G T A C T A G T C G A C G T A A G T C C G T A C G T A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

PB0123.1_Foxl1_2/Jaspar

Match Rank:7
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-AGACAGAAGAAAA--
ATATCAAAACAAAACA
 A C G T G T C A C T A G C T G A G T A C G C T A C T A G C G T A C G T A C T A G C G T A C G T A G T C A C T G A A C G T A C G T
G C T A C G A T C G T A C G A T G A T C G C T A G C T A G T C A C G T A A G T C C G T A C G T A G T C A C G T A G T A C G T C A

PB0061.1_Sox11_1/Jaspar

Match Rank:8
Score:0.59
Offset:1
Orientation:forward strand
Alignment:AGACAGAAGAAAA-----
-ATAAGAACAAAGGACTA
 G T C A C T A G C T G A G T A C G C T A C T A G C G T A C G T A C T A G C G T A C G T A G T C A C T G A A C G T A C G T A C G T A C G T A C G T
A C G T G C T A A C G T C G T A C G T A C T A G T C G A C G T A A G T C C G T A G T C A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

STAT1::STAT2/MA0517.1/Jaspar

Match Rank:9
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:AGACAGAAGAAAA---
-GGAAANTGAAACTNA
 G T C A C T A G C T G A G T A C G C T A C T A G C G T A C G T A C T A G C G T A C G T A G T C A C T G A A C G T A C G T A C G T
A C G T T C A G C T A G C T G A C G T A T C G A T G C A G A C T C T A G T C G A C G T A C T G A A T G C G A C T C T A G G T C A

PB0093.1_Zfp105_1/Jaspar

Match Rank:10
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-AGACAGAAGAAAA-
AACAAACAACAAGAG
 A C G T G T C A C T A G C T G A G T A C G C T A C T A G C G T A C G T A C T A G C G T A C G T A G T C A C T G A A C G T
G C T A C G T A G A T C G T C A C G T A G C T A G A T C C T G A C G T A G T A C C T G A G C T A C A T G C G T A C T A G