Information for 7-CAAAGGTACA (Motif 7)

A G T C G T C A G T C A C G T A A C T G A C T G C G A T G C T A G T A C C G T A
Reverse Opposite:
A C G T A C T G C A G T C G T A G T A C A G T C C G A T A C G T A C G T A C T G
p-value:1e-19
log p-value:-4.572e+01
Information Content per bp:1.859
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif1.84%
Number of Background Sequences with motif3.4
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets53.0 +/- 23.2bp
Average Position of motif in Background48.7 +/- 17.4bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox2/MA0143.3/Jaspar

Match Rank:1
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--CAAAGGTACA
AACAAAGG----
 A C G T A C G T A G T C G T C A G T C A C G T A A C T G A C T G C G A T G C T A G T A C C G T A
T C G A C G T A A G T C C G T A C G T A C G T A A C T G A C T G A C G T A C G T A C G T A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:2
Score:0.64
Offset:1
Orientation:forward strand
Alignment:CAAAGGTACA-
-CCAGGAACAG
 A G T C G T C A G T C A C G T A A C T G A C T G C G A T G C T A G T A C C G T A A C G T
A C G T T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G

ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer

Match Rank:3
Score:0.63
Offset:1
Orientation:forward strand
Alignment:CAAAGGTACA-
-VCAGGTRDRY
 A G T C G T C A G T C A C G T A A C T G A C T G C G A T G C T A G T A C C G T A A C G T
A C G T T G C A G T A C C G T A A T C G A C T G A C G T C T A G C G A T T C G A A G T C

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:4
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--CAAAGGTACA
RACAAWGG----
 A C G T A C G T A G T C G T C A G T C A C G T A A C T G A C T G C G A T G C T A G T A C C G T A
T C G A G T C A T G A C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T

Sox3/MA0514.1/Jaspar

Match Rank:5
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----CAAAGGTACA
AAAACAAAGG----
 A C G T A C G T A C G T A C G T A G T C G T C A G T C A C G T A A C T G A C T G C G A T G C T A G T A C C G T A
T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:6
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----CAAAGGTACA
ACWTCAAAGG----
 A C G T A C G T A C G T A C G T A G T C G T C A G T C A C G T A A C T G A C T G C G A T G C T A G T A C C G T A
C G T A A T G C C G A T A C G T A G T C C G T A C G T A C G T A C T A G A T C G A C G T A C G T A C G T A C G T

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:7
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----CAAAGGTACA
ACATCAAAGG----
 A C G T A C G T A C G T A C G T A G T C G T C A G T C A C G T A A C T G A C T G C G A T G C T A G T A C C G T A
C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T

NR1H2::RXRA/MA0115.1/Jaspar

Match Rank:8
Score:0.61
Offset:-6
Orientation:forward strand
Alignment:------CAAAGGTACA-
AAAGGTCAAAGGTCAAC
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C G T C A G T C A C G T A A C T G A C T G C G A T G C T A G T A C C G T A A C G T
G T C A C T G A C T G A A C T G A C T G A C G T A G T C C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A C G T A A T G C

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:9
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----CAAAGGTACA
GGAACAAAGR----
 A C G T A C G T A C G T A C G T A G T C G T C A G T C A C G T A A C T G A C T G C G A T G C T A G T A C C G T A
T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G A C G T A C G T A C G T A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:10
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----CAAAGGTACA
VRRACAAWGG----
 A C G T A C G T A C G T A C G T A G T C G T C A G T C A C G T A A C T G A C T G C G A T G C T A G T A C C G T A
T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G A C G T A C G T A C G T A C G T