Homer Known Motif Enrichment Results (hs_HepatocellularCarcinoma_HepG2_cancer_HNF4A_SRX100505_homermotifs_10_13_16)

Homer de novo Motif Results
Gene Ontology Enrichment Results
Known Motif Enrichment Results (txt file)
Total Target Sequences = 810, Total Background Sequences = 47935
RankMotifNameP-valuelog P-pvalueq-value (Benjamini)# Target Sequences with Motif% of Targets Sequences with Motif# Background Sequences with Motif% of Background Sequences with MotifMotif File SVG
1 G T A C G C T A T C A G C T G A C T A G C A T G A G C T G A T C T G C A T C G A C T G A A C T G C A G T A G T C G A T C G C T A HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer1e-130-3.008e+020.0000189.023.33%1040.22.17%motif file (matrix) svg
2 A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer1e-62-1.438e+020.0000277.034.20%5598.411.69%motif file (matrix) svg
3 A G C T C T G A C T A G C T A G A C T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C T C G A RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer1e-39-9.207e+010.0000156.019.26%2716.55.67%motif file (matrix) svg
4 C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G T A C G A T C G T C A PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer1e-36-8.477e+010.0000134.016.54%2189.24.57%motif file (matrix) svg
5 G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer1e-31-7.254e+010.0000106.013.09%1606.93.35%motif file (matrix) svg
6 A C G T C T A G A G C T A C G T A C G T C T G A A G T C G A C T A G C T C G T A FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer1e-31-7.204e+010.0000112.013.83%1793.63.74%motif file (matrix) svg
7 G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer1e-30-7.086e+010.0000121.014.94%2096.54.38%motif file (matrix) svg
8 A T G C G A C T A C G T C T A G A C G T A C G T A C G T C T G A G A T C G C T A A G C T C G T A Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer1e-29-6.860e+010.0000100.012.35%1510.83.15%motif file (matrix) svg
9 T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer1e-27-6.378e+010.000042.05.19%240.00.50%motif file (matrix) svg
10 A G T C T A G C G A C T A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C T A G A C T C G T A C T A G A C T G Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer1e-25-5.972e+010.000056.06.91%530.11.11%motif file (matrix) svg
11 A C G T C T A G C G T A A G T C G T A C A C G T A C G T A C G T G T C A G T A C T G A C G A C T Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer1e-23-5.368e+010.000041.05.06%296.40.62%motif file (matrix) svg
12 T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer1e-22-5.155e+010.000049.06.05%473.60.99%motif file (matrix) svg
13 T C A G C T G A C T A G C A T G A C G T A T G C C T G A C T G A C T G A C T A G C A T G A C G T A T G C C T G A TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer1e-20-4.673e+010.000034.04.20%230.70.48%motif file (matrix) svg
14 G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer1e-19-4.586e+010.0000300.037.04%10819.922.59%motif file (matrix) svg
15 A T G C C T G A A T C G T A C G A G T C C G A T T C A G C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A T A C G C T G A Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer1e-19-4.482e+010.000098.012.10%2023.44.22%motif file (matrix) svg
16 C A T G A G C T T A C G G T C A G T A C T A G C A G C T G A C T A T C G T C G A Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer1e-15-3.674e+010.000071.08.77%1345.32.81%motif file (matrix) svg
17 T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer1e-15-3.552e+010.0000143.017.65%4145.08.65%motif file (matrix) svg
18 C G T A G C T A C G A T C T A G A C G T G T C A C G T A C G T A A G T C C G T A T G C A T A C G FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer1e-13-3.200e+010.000065.08.02%1278.22.67%motif file (matrix) svg
19 C T G A A T G C G C T A G C A T A T G C C G T A T C G A C T G A C T A G T C A G T A C G G T C A Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer1e-13-3.066e+010.000049.06.05%806.51.68%motif file (matrix) svg
20 G C A T G C A T C T G A A C G T C T G A A C G T C G T A C G T A C G T A A G T C G T C A G T C A Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer1e-11-2.681e+010.000061.07.53%1298.12.71%motif file (matrix) svg
21 C G A T C T A G A C G T G T C A C G T A C G T A A G T C C G T A Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer1e-11-2.645e+010.000060.07.41%1275.32.66%motif file (matrix) svg
22 A G C T T G A C C G A T C G A T C T A G A C G T C A G T C A G T G C T A A G T C FOXK1(Forkhead)/HEK293-FOXK1-ChIP-Seq(GSE51673)/Homer1e-11-2.609e+010.000075.09.26%1833.23.83%motif file (matrix) svg
23 C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer1e-10-2.345e+010.000031.03.83%439.40.92%motif file (matrix) svg
24 A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer1e-10-2.321e+010.000066.08.15%1607.33.36%motif file (matrix) svg
25 A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer1e-9-2.152e+010.000054.06.67%1228.02.56%motif file (matrix) svg
26 T C G A A C T G C A T G A G C T A G T C C G T A C T G A C T A G A C T G C G A T A T G C C T G A RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer1e-8-1.894e+010.000020.02.47%231.30.48%motif file (matrix) svg
27 T A C G T A G C G C T A C G A T C T A G A C G T C A G T C A G T G C T A A G T C G T C A G C A T FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer1e-8-1.855e+010.000051.06.30%1228.32.56%motif file (matrix) svg
28 T G C A A G C T A C G T C T A G G A T C C T A G G A T C G T C A C T G A A G T C CEBP(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer1e-6-1.557e+010.000047.05.80%1198.52.50%motif file (matrix) svg
29 T C A G G A C T C A G T C T G A A G C T C T A G G A C T T G C A C T G A A G T C HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer1e-6-1.550e+010.000047.05.80%1201.32.51%motif file (matrix) svg
30 A G T C A C G T A C T G A G C T A C G T A C G T G T C A A G T C Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer1e-6-1.464e+010.0000116.014.32%4292.88.96%motif file (matrix) svg
31 C G T A A T G C C G A T A C G T A G T C C G T A C G T A C G T A C T A G A T C G TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer1e-5-1.370e+010.000014.01.73%162.70.34%motif file (matrix) svg
32 A G C T A G T C A G T C A C G T C T A G A C G T A C G T A C G T C G T A A G T C G A T C C G T A FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer1e-5-1.248e+010.000031.03.83%722.91.51%motif file (matrix) svg
33 C T G A C T A G A C T G G C A T A T G C C G T A C T G A C T A G A C T G A C G T A G T C C T G A RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer1e-5-1.178e+010.00018.00.99%57.00.12%motif file (matrix) svg
34 T A C G A T G C G C T A A C T G C G T A A C G T C G T A C T G A T A C G T C G A Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer1e-4-1.123e+010.000149.06.05%1496.83.12%motif file (matrix) svg
35 A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer1e-4-1.109e+010.000298.012.10%3752.47.83%motif file (matrix) svg
36 T A G C G C T A A C T G C G T A A C G T C G T A C G T A T A C G T C A G T C G A Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer1e-4-1.082e+010.000232.03.95%826.71.73%motif file (matrix) svg
37 A G C T A T G C G A C T G C A T C G T A A G C T G T A C C G A T A T C G A G T C Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer1e-4-9.295e+000.000942.05.19%1314.52.74%motif file (matrix) svg
38 C T A G C T A G G C A T C G A T C T G A G T C A G C T A A T G C C G T A C A G T G A C T C G T A T G C A Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer1e-3-8.998e+000.001210.01.23%134.30.28%motif file (matrix) svg
39 G C T A A C T G T C G A C T G A C T G A A C G T T A G C C T G A C G T A C G A T Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer1e-3-8.969e+000.001223.02.84%561.01.17%motif file (matrix) svg
40 A G C T A G T C A T G C A G C T A C G T C G T A A C G T A G T C C G A T A T G C Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer1e-3-8.957e+000.001232.03.95%914.21.91%motif file (matrix) svg
41 C A T G A C G T A G T C G A T C G A T C G A T C G C T A C T A G C T A G C T A G T C A G T C G A EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer1e-3-8.914e+000.001277.09.51%2950.86.16%motif file (matrix) svg
42 C T A G C A G T C G T A A C G T A G T C A C T G C G T A A G C T A G T C G A T C HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer1e-3-8.693e+000.001528.03.46%766.51.60%motif file (matrix) svg
43 G A T C G T A C C G A T A C T G A C T G C G T A C G T A A C G T A C T G G A T C TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer1e-3-8.642e+000.001537.04.57%1140.22.38%motif file (matrix) svg
44 A T G C G A T C C G A T A C G T A C G T A C T G C A G T A G C T Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer1e-3-8.437e+000.001897.011.98%3983.78.32%motif file (matrix) svg
45 C A T G G T A C C G T A A G T C C T A G A C G T A C T G G T A C A G T C A G C T bHLHE40(bHLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer1e-3-8.092e+000.002521.02.59%521.61.09%motif file (matrix) svg
46 T G C A A G C T C A T G C G T A A G C T A C T G G A T C G T C A C G T A A G C T Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer1e-3-7.915e+000.002917.02.10%381.60.80%motif file (matrix) svg
47 A T G C G T A C C G T A A G C T G C A T T A C G A G C T A G C T A G T C A G C T Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer1e-3-7.295e+000.005384.010.37%3467.17.24%motif file (matrix) svg
48 C T G A T C A G C T G A C T A G C A T G A C G T A T G C C G T A A T G C G C A T T C A G C T G A A C T G A C G T C A G T A G T C C G T A C A G T C T A G C A T G VDR(NR),DR3/GM10855-VDR+vitD-ChIP-Seq(GSE22484)/Homer1e-3-7.065e+000.006516.01.98%375.70.78%motif file (matrix) svg
49 A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer1e-3-6.949e+000.007150.06.17%1849.03.86%motif file (matrix) svg
50 C T A G T C G A C G A T C T A G G C A T C A G T C T A G G A T C C G T A G T C A CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer1e-2-6.811e+000.008042.05.19%1488.33.11%motif file (matrix) svg
51 C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer1e-2-6.697e+000.008868.08.40%2741.65.72%motif file (matrix) svg
52 T G C A T A G C G A C T T G C A T G A C T G C A C G T A A G C T A G C T A G T C A G T C G T A C GFY(?)/Promoter/Homer1e-2-6.152e+000.014910.01.23%195.40.41%motif file (matrix) svg
53 T A C G T C A G A G C T A T G C C G T A A G T C T C A G A C G T A C T G T C G A USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer1e-2-5.843e+000.019925.03.09%797.21.66%motif file (matrix) svg
54 T A C G T C G A T A G C A G T C C G T A A G T C C T A G G C A T A C T G A T C G n-Myc(bHLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer1e-2-5.841e+000.019938.04.69%1384.02.89%motif file (matrix) svg
55 C G T A C T A G T C A G T C A G A G T C A T G C A G T C G C A T A G C T A C G T A T C G C G A T Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer1e-2-5.709e+000.022049.06.05%1918.24.00%motif file (matrix) svg
56 C T G A T G A C T G A C C G T A A C G T T G A C A G C T C T A G A C G T G A C T Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer1e-2-5.606e+000.023999.012.22%4466.69.32%motif file (matrix) svg
57 G C T A A T C G G C T A G A C T G C T A T C G A T A G C T C G A GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer1e-2-5.537e+000.025256.06.91%2279.44.76%motif file (matrix) svg
58 T G C A T C G A T A G C G T A C T C A G C T A G G T C A G C T A T C A G G A C T ETS(ETS)/Promoter/Homer1e-2-5.490e+000.025926.03.21%864.21.80%motif file (matrix) svg
59 C T A G A C G T G C A T T C G A G T C A G C A T A T C G C G T A C A G T A G C T C T G A T G C A HNF1b(Homeobox)/PDAC-HNF1B-ChIP-Seq(GSE64557)/Homer1e-2-5.432e+000.02708.00.99%149.80.31%motif file (matrix) svg
60 T C A G A G C T A T G C C G T A A G T C T C A G A C G T A T C G T C G A A G T C G A T C T G A C TFE3(bHLH)/MEF-TFE3-ChIP-Seq(GSE75757)/Homer1e-2-5.355e+000.02876.00.74%90.50.19%motif file (matrix) svg
61 T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer1e-2-5.240e+000.031629.03.58%1017.72.12%motif file (matrix) svg
62 C T A G C A G T T G A C C G T A G A T C T C A G G A C T C A T G BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer1e-2-4.984e+000.040282.010.12%3675.57.67%motif file (matrix) svg
63 T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer1e-2-4.976e+000.040246.05.68%1849.43.86%motif file (matrix) svg
64 C A G T T C A G G A T C A C T G A C G T C T A G A C T G A C T G G A C T C T A G Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer1e-2-4.774e+000.048042.05.19%1675.83.50%motif file (matrix) svg
65 C G A T T G C A G T A C C G T A A G T C C T A G G A C T C A T G NPAS(bHLH)/Liver-NPAS-ChIP-Seq(GSE39860)/Homer1e-2-4.739e+000.049072.08.89%3193.66.67%motif file (matrix) svg