Information for 4-TCABTGTCHHCTTTGG (Motif 7)

A C G T G T A C C G T A A C G T A C G T A C T G C G A T A G T C G C T A G A T C A G T C A C G T A G C T A C G T A C T G A C T G
Reverse Opposite:
G T A C G T A C G T C A C T G A C G T A A C T G C A T G C A G T A C T G C G T A A G T C C G T A T G A C A C G T A C T G G T C A
p-value:1e-12
log p-value:-2.781e+01
Information Content per bp:1.794
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.99%
Number of Background Sequences with motif7.4
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets47.1 +/- 24.9bp
Average Position of motif in Background58.9 +/- 35.5bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox17/MA0078.1/Jaspar

Match Rank:1
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-TCABTGTCHHCTTTGG
CTCATTGTC--------
 A C G T A C G T G T A C C G T A A C G T A C G T A C T G C G A T A G T C G C T A G A T C A G T C A C G T A G C T A C G T A C T G A C T G
G A C T G A C T G A T C C G T A A G C T A C G T A C T G A C G T A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:2
Score:0.60
Offset:4
Orientation:forward strand
Alignment:TCABTGTCHHCTTTGG
----TGTCANYT----
 A C G T G T A C C G T A A C G T A C G T A C T G C G A T A G T C G C T A G A T C A G T C A C G T A G C T A C G T A C T G A C T G
A C G T A C G T A C G T A C G T A G C T C A T G G C A T G A T C T G C A C T A G G A T C A C G T A C G T A C G T A C G T A C G T

FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer

Match Rank:3
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---TCABTGTCHHCTTTGG
AGGTCANTGACCTN-----
 A C G T A C G T A C G T A C G T G T A C C G T A A C G T A C G T A C T G C G A T A G T C G C T A G A T C A G T C A C G T A G C T A C G T A C T G A C T G
T C G A C A T G C A T G A C G T A T G C T C G A C T G A A G C T T A C G T G C A G T A C G A T C A G C T A G T C A C G T A C G T A C G T A C G T A C G T

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:4
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:TCABTGTCHHCTTTGG
----TGACACCT----
 A C G T G T A C C G T A A C G T A C G T A C T G C G A T A G T C G C T A G A T C A G T C A C G T A G C T A C G T A C T G A C T G
A C G T A C G T A C G T A C G T G A C T T C A G C T G A A G T C C T G A T A G C G A T C G A C T A C G T A C G T A C G T A C G T

PB0195.1_Zbtb3_2/Jaspar

Match Rank:5
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---TCABTGTCHHCTTTGG
CAATCACTGGCAGAAT---
 A C G T A C G T A C G T A C G T G T A C C G T A A C G T A C G T A C T G C G A T A G T C G C T A G A T C A G T C A C G T A G C T A C G T A C T G A C T G
A G T C G C T A T C G A G C A T G T A C C T G A T G A C C G A T A C T G A C T G A G T C C T G A C T A G G C T A C G T A C G A T A C G T A C G T A C G T

Sox6/MA0515.1/Jaspar

Match Rank:6
Score:0.54
Offset:0
Orientation:forward strand
Alignment:TCABTGTCHHCTTTGG
CCATTGTTTT------
 A C G T G T A C C G T A A C G T A C G T A C T G C G A T A G T C G C T A G A T C A G T C A C G T A G C T A C G T A C T G A C T G
A G T C A G T C C G T A A C G T A C G T A C T G A C G T A G C T G A C T A G C T A C G T A C G T A C G T A C G T A C G T A C G T

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:7
Score:0.54
Offset:3
Orientation:forward strand
Alignment:TCABTGTCHHCTTTGG
---YTGWCADY-----
 A C G T G T A C C G T A A C G T A C G T A C T G C G A T A G T C G C T A G A T C A G T C A C G T A G C T A C G T A C T G A C T G
A C G T A C G T A C G T G A C T G C A T C T A G C G A T G A T C T C G A C A T G G A T C A C G T A C G T A C G T A C G T A C G T

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:8
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-TCABTGTCHHCTTTGG
BTGABTGACAGS-----
 A C G T A C G T G T A C C G T A A C G T A C G T A C T G C G A T A G T C G C T A G A T C A G T C A C G T A G C T A C G T A C T G A C T G
A C G T C G A T A C T G C G T A A C G T A C G T A C T G C T G A A G T C C T G A T A C G A T G C A C G T A C G T A C G T A C G T A C G T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:9
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:TCABTGTCHHCTTTGG
----TGACCYCT----
 A C G T G T A C C G T A A C G T A C G T A C T G C G A T A G T C G C T A G A T C A G T C A C G T A G C T A C G T A C T G A C T G
A C G T A C G T A C G T A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T A C G T A C G T A C G T A C G T

SOX10/MA0442.1/Jaspar

Match Rank:10
Score:0.52
Offset:1
Orientation:forward strand
Alignment:TCABTGTCHHCTTTGG
-CTTTGT---------
 A C G T G T A C C G T A A C G T A C G T A C T G C G A T A G T C G C T A G A T C A G T C A C G T A G C T A C G T A C T G A C T G
A C G T A G T C C G A T A C G T A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T