Information for 7-GCWAGAAAGRWAS (Motif 5)

A C T G A T G C C G A T C T G A A C T G C G T A C T G A C G T A A C T G C T G A C G T A C G T A A T C G
Reverse Opposite:
A T G C A C G T C G A T A G C T A G T C A C G T A G C T A C G T A G T C A G C T C G T A A T C G A G T C
p-value:1e-12
log p-value:-2.946e+01
Information Content per bp:1.871
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.86%
Number of Background Sequences with motif3.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets52.3 +/- 28.8bp
Average Position of motif in Background38.6 +/- 21.0bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0137.1_Irf3_2/Jaspar

Match Rank:1
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GCWAGAAAGRWAS--
-GGAGAAAGGTGCGA
 A C T G A T G C C G A T C T G A A C T G C G T A C T G A C G T A A C T G C T G A C G T A C G T A A T C G A C G T A C G T
A C G T C T A G C A T G C G T A C T A G C G T A G C T A C G T A A T C G T A C G C G A T A T C G A G T C C T A G C T G A

EWSR1-FLI1/MA0149.1/Jaspar

Match Rank:2
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GCWAGAAAGRWAS-----
GGAAGGAAGGAAGGAAGG
 A C T G A T G C C G A T C T G A A C T G C G T A C T G A C G T A A C T G C T G A C G T A C G T A A T C G A C G T A C G T A C G T A C G T A C G T
A C T G C T A G C T G A C T G A C T A G C T A G C T G A C T G A A C T G A T C G T G C A C G T A A C T G A T C G G T C A C T G A C T A G T A C G

CDX2/MA0465.1/Jaspar

Match Rank:3
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GCWAGAAAGRWAS
AAGCCATAAAA----
 A C G T A C G T A C T G A T G C C G A T C T G A A C T G C G T A C T G A C G T A A C T G C T G A C G T A C G T A A T C G
T C G A C T G A T C A G A G T C G T A C C G T A A C G T C G T A C G T A C G T A T C G A A C G T A C G T A C G T A C G T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:4
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:GCWAGAAAGRWAS
GGAACAAAGR---
 A C T G A T G C C G A T C T G A A C T G C G T A C T G A C G T A A C T G C T G A C G T A C G T A A T C G
T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G A C G T A C G T A C G T

SOX10/MA0442.1/Jaspar

Match Rank:5
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:GCWAGAAAGRWAS
---ACAAAG----
 A C T G A T G C C G A T C T G A A C T G C G T A C T G A C G T A A C T G C T G A C G T A C G T A A T C G
A C G T A C G T A C G T G T C A A T G C C G T A T G C A C G T A C T A G A C G T A C G T A C G T A C G T

PB0006.1_Bcl6b_1/Jaspar

Match Rank:6
Score:0.56
Offset:-6
Orientation:reverse strand
Alignment:------GCWAGAAAGRWAS
NNNATTCCTCGAAAGN---
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A T G C C G A T C T G A A C T G C G T A C T G A C G T A A C T G C T G A C G T A C G T A A T C G
A T G C C T G A C G T A C G T A C G A T G C A T G T A C A G T C G C A T T G A C C T A G G C T A C G T A C T G A C T A G G C T A A C G T A C G T A C G T

BCL6B/MA0731.1/Jaspar

Match Rank:7
Score:0.55
Offset:-6
Orientation:reverse strand
Alignment:------GCWAGAAAGRWAS
TGAATTCCTAGAAAGCA--
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A T G C C G A T C T G A A C T G C G T A C T G A C G T A A C T G C T G A C G T A C G T A A T C G
A C G T A C T G C T G A C T G A A C G T A G C T A G T C A G T C A C G T T G C A A C T G G T C A C G T A C G T A C T A G G A T C C T G A A C G T A C G T

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:8
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GCWAGAAAGRWAS
TACTGGAAAAAAAA
 A C G T A C T G A T G C C G A T C T G A A C T G C G T A C T G A C G T A A C T G C T G A C G T A C G T A A T C G
G C A T C T G A T G A C C A G T A C G T T C A G C G T A C G T A T C G A T C G A G C T A G T C A C G T A C T G A

Bcl6/MA0463.1/Jaspar

Match Rank:9
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---GCWAGAAAGRWAS
TTTCCTAGAAAGCA--
 A C G T A C G T A C G T A C T G A T G C C G A T C T G A A C T G C G T A C T G A C G T A A C T G C T G A C G T A C G T A A T C G
C A G T C G A T A G C T G T A C A G T C A C G T T C G A C T A G C T G A T C G A C T G A C A T G G T A C G C T A A C G T A C G T

T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer

Match Rank:10
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:GCWAGAAAGRWAS--
---AGAAACGAAAGT
 A C T G A T G C C G A T C T G A A C T G C G T A C T G A C G T A A C T G C T G A C G T A C G T A A T C G A C G T A C G T
A C G T A C G T A C G T T C G A C T A G C T G A C G T A C G T A A G T C T A C G C G T A C G T A C G T A A T C G A C G T