Information for 9-CCCTGCACTTCAG (Motif 12)

G T A C A G T C A G T C A C G T A C T G T A G C C T G A A G T C A C G T A G C T G T A C G T C A A C T G
Reverse Opposite:
A G T C A C G T A C T G T C G A C G T A A C T G A G C T A C T G A G T C C G T A C T A G A C T G A C T G
p-value:1e-9
log p-value:-2.295e+01
Information Content per bp:1.838
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.99%
Number of Background Sequences with motif13.0
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets58.1 +/- 20.6bp
Average Position of motif in Background56.1 +/- 22.9bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:1
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:CCCTGCACTTCAG
---NSCACTYVAV
 G T A C A G T C A G T C A C G T A C T G T A G C C T G A A G T C A C G T A G C T G T A C G T C A A C T G
A C G T A C G T A C G T C T A G T A G C A G T C G C T A G A T C A C G T G A T C T C G A C T G A T A C G

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:2
Score:0.64
Offset:3
Orientation:forward strand
Alignment:CCCTGCACTTCAG
---RSCACTYRAG
 G T A C A G T C A G T C A C G T A C T G T A G C C T G A A G T C A C G T A G C T G T A C G T C A A C T G
A C G T A C G T A C G T C T A G T A C G A G T C C G T A A G T C A C G T A G T C T C G A C G T A T A C G

NKX2-8/MA0673.1/Jaspar

Match Rank:3
Score:0.64
Offset:4
Orientation:forward strand
Alignment:CCCTGCACTTCAG
----CCACTTGAA
 G T A C A G T C A G T C A C G T A C T G T A G C C T G A A G T C A C G T A G C T G T A C G T C A A C T G
A C G T A C G T A C G T A C G T T A G C G A T C G T C A G A T C A G C T G A C T T A C G G C T A T C G A

Gabpa/MA0062.2/Jaspar

Match Rank:4
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:CCCTGCACTTCAG-
---NCCACTTCCGG
 G T A C A G T C A G T C A C G T A C T G T A G C C T G A A G T C A C G T A G C T G T A C G T C A A C T G A C G T
A C G T A C G T A C G T A C T G A G T C A G T C C T G A A G T C C A G T A C G T A G T C G T A C A C T G A T C G

ISL2/MA0914.1/Jaspar

Match Rank:5
Score:0.59
Offset:4
Orientation:forward strand
Alignment:CCCTGCACTTCAG
----GCACTTAA-
 G T A C A G T C A G T C A C G T A C T G T A G C C T G A A G T C A C G T A G C T G T A C G T C A A C T G
A C G T A C G T A C G T A C G T T A C G G A T C G C T A G T A C C G A T G A C T G C T A C T G A A C G T

NKX2-3/MA0672.1/Jaspar

Match Rank:6
Score:0.59
Offset:3
Orientation:forward strand
Alignment:CCCTGCACTTCAG
---ACCACTTGAA
 G T A C A G T C A G T C A C G T A C T G T A G C C T G A A G T C A C G T A G C T G T A C G T C A A C T G
A C G T A C G T A C G T T G C A T A G C G A T C G C T A G T A C A C G T A G C T T C A G C G T A T C G A

ETV6/MA0645.1/Jaspar

Match Rank:7
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:CCCTGCACTTCAG--
-----CACTTCCGCT
 G T A C A G T C A G T C A C G T A C T G T A G C C T G A A G T C A C G T A G C T G T A C G T C A A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G A T C T C G A A G T C G C A T A G C T G T A C G T A C A C T G T A G C A C G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:8
Score:0.58
Offset:2
Orientation:forward strand
Alignment:CCCTGCACTTCAG
--AASCACTCAA-
 G T A C A G T C A G T C A C G T A C T G T A G C C T G A A G T C A C G T A G C T G T A C G T C A A C T G
A C G T A C G T C T G A C T G A T A G C G A T C G C T A G T A C A C G T G A T C T G C A C G T A A C G T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:9
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:CCCTGCACTTCAG
--MRSCACTYAA-
 G T A C A G T C A G T C A C G T A C T G T A G C C T G A A G T C A C G T A G C T G T A C G T C A A C T G
A C G T A C G T G T C A C T G A T A G C A G T C C G T A G T A C G C A T A G T C C T G A T C G A A C G T

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CCCTGCACTTCAG
-GTTTCACTTCCG
 G T A C A G T C A G T C A C G T A C T G T A G C C T G A A G T C A C G T A G C T G T A C G T C A A C T G
A C G T A T C G G A C T A C G T A G C T A G T C G C T A A G T C G C A T A C G T A G T C G A T C A C T G