Information for 1-AAAGCAAACA (Motif 9)

G C T A C T G A C T G A A T C G A G T C T G C A T G C A T C G A G T A C C G T A
Reverse Opposite:
G C A T C A T G A G C T A C G T A C G T T C A G T A G C G A C T G A C T C G A T
p-value:1e-11
log p-value:-2.562e+01
Information Content per bp:1.553
Number of Target Sequences with motif154.0
Percentage of Target Sequences with motif18.16%
Number of Background Sequences with motif4978.3
Percentage of Background Sequences with motif10.40%
Average Position of motif in Targets46.5 +/- 25.8bp
Average Position of motif in Background49.0 +/- 30.0bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.15
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:1
Score:0.83
Offset:0
Orientation:reverse strand
Alignment:AAAGCAAACA
WAAGTAAAYA
 G C T A C T G A C T G A A T C G A G T C T G C A T G C A T C G A G T A C C G T A
G C A T T C G A C T G A T C A G A G C T G T C A G T C A C T G A A G T C T G C A

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:2
Score:0.83
Offset:0
Orientation:forward strand
Alignment:AAAGCAAACA
AAAGTAAACA
 G C T A C T G A C T G A A T C G A G T C T G C A T G C A T C G A G T A C C G T A
G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:3
Score:0.83
Offset:0
Orientation:forward strand
Alignment:AAAGCAAACA
AAAGTAAACA
 G C T A C T G A C T G A A T C G A G T C T G C A T G C A T C G A G T A C C G T A
G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A

FOXA1/MA0148.3/Jaspar

Match Rank:4
Score:0.80
Offset:-1
Orientation:reverse strand
Alignment:-AAAGCAAACA----
CAAAGTAAACANNNN
 A C G T G C T A C T G A C T G A A T C G A G T C T G C A T G C A T C G A G T A C C G T A A C G T A C G T A C G T A C G T
G T A C G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C G C T A C G A T T A C G T C A G C T G A

MF0005.1_Forkhead_class/Jaspar

Match Rank:5
Score:0.77
Offset:1
Orientation:reverse strand
Alignment:AAAGCAAACA
-AAATAAACA
 G C T A C T G A C T G A A T C G A G T C T G C A T G C A T C G A G T A C C G T A
A C G T T C G A G T C A T C G A G A C T G T C A C T G A T C G A G A T C C G T A

FOXP1/MA0481.1/Jaspar

Match Rank:6
Score:0.77
Offset:-2
Orientation:forward strand
Alignment:--AAAGCAAACA---
CAAAAGTAAACAAAG
 A C G T A C G T G C T A C T G A C T G A A T C G A G T C T G C A T G C A T C G A G T A C C G T A A C G T A C G T A C G T
G T A C G C T A C G T A T C G A C T G A T C A G G C A T C G T A C G T A C G T A T G A C C G T A T G C A C G T A T C A G

FOXC2/MA0846.1/Jaspar

Match Rank:7
Score:0.76
Offset:0
Orientation:forward strand
Alignment:AAAGCAAACA--
TAAGTAAACAAA
 G C T A C T G A C T G A A T C G A G T C T G C A T G C A T C G A G T A C C G T A A C G T A C G T
G C A T C T G A G C T A T C A G G A C T G T C A G T C A C T G A A G T C C T G A G C T A G C T A

Foxa2/MA0047.2/Jaspar

Match Rank:8
Score:0.75
Offset:-2
Orientation:reverse strand
Alignment:--AAAGCAAACA
NCTAAGTAAACA
 A C G T A C G T G C T A C T G A C T G A A T C G A G T C T G C A T G C A T C G A G T A C C G T A
T A G C G T A C G C A T T C G A C G T A C T A G A G C T G T C A T G C A C G T A A G T C C G T A

FOXP2/MA0593.1/Jaspar

Match Rank:9
Score:0.75
Offset:1
Orientation:forward strand
Alignment:AAAGCAAACA--
-AAGTAAACAAA
 G C T A C T G A C T G A A T C G A G T C T G C A T G C A T C G A G T A C C G T A A C G T A C G T
A C G T C T G A C G T A C T A G C G A T C G T A C G T A C G T A A G T C C G T A T C G A C T G A

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:10
Score:0.75
Offset:-5
Orientation:forward strand
Alignment:-----AAAGCAAACA--
NNNVCTGWGYAAACASN
 A C G T A C G T A C G T A C G T A C G T G C T A C T G A C T G A A T C G A G T C T G C A T G C A T C G A G T A C C G T A A C G T A C G T
A T G C C T G A A T C G T A C G A G T C C G A T T C A G C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A T A C G C T G A