Information for 4-SAAAYATTTGCWRRYC (Motif 6)

A T G C C G T A C G T A C G T A A G T C C G T A A C G T A C G T A C G T A C T G A G T C G C A T C T G A C T A G A G C T A G T C
Reverse Opposite:
A C T G C T G A A G T C A G C T C G T A A C T G A G T C C G T A C G T A C G T A A C G T C T A G A C G T A C G T A C G T A T C G
p-value:1e-12
log p-value:-2.914e+01
Information Content per bp:1.859
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.83%
Number of Background Sequences with motif3.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets40.3 +/- 20.5bp
Average Position of motif in Background23.1 +/- 4.4bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:1
Score:0.61
Offset:5
Orientation:reverse strand
Alignment:SAAAYATTTGCWRRYC
-----ATTTGCATAT-
 A T G C C G T A C G T A C G T A A G T C C G T A A C G T A C G T A C G T A C T G A G T C G C A T C T G A C T A G A G C T A G T C
A C G T A C G T A C G T A C G T A C G T G C T A C G A T G A C T A C G T C T A G G A T C G T C A C G A T C G T A C A G T A C G T

BHLHE23/MA0817.1/Jaspar

Match Rank:2
Score:0.61
Offset:1
Orientation:forward strand
Alignment:SAAAYATTTGCWRRYC
-AAACATATGTTT---
 A T G C C G T A C G T A C G T A A G T C C G T A A C G T A C G T A C G T A C T G A G T C G C A T C T G A C T A G A G C T A G T C
A C G T C G T A T C G A T G C A G T A C C T G A A G C T T G C A G A C T A C T G A C G T G A C T C G A T A C G T A C G T A C G T

POU2F2/MA0507.1/Jaspar

Match Rank:3
Score:0.60
Offset:2
Orientation:forward strand
Alignment:SAAAYATTTGCWRRYC
--TTCATTTGCATAT-
 A T G C C G T A C G T A C G T A A G T C C G T A A C G T A C G T A C G T A C T G A G T C G C A T C T G A C T A G A G C T A G T C
A C G T A C G T G A C T C A G T G T A C G C T A A C G T G C A T A C G T C T A G A G T C G T C A A G C T C T G A G C A T A C G T

Arid5a/MA0602.1/Jaspar

Match Rank:4
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----SAAAYATTTGCWRRYC
NNTNNCAATATTAG------
 A C G T A C G T A C G T A C G T A T G C C G T A C G T A C G T A A G T C C G T A A C G T A C G T A C G T A C T G A G T C G C A T C T G A C T A G A G C T A G T C
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G A C G T A C G T A C G T A C G T A C G T A C G T

PB0002.1_Arid5a_1/Jaspar

Match Rank:5
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----SAAAYATTTGCWRRYC
NNTNNCAATATTAG------
 A C G T A C G T A C G T A C G T A T G C C G T A C G T A C G T A A G T C C G T A A C G T A C G T A C G T A C T G A G T C G C A T C T G A C T A G A G C T A G T C
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G A C G T A C G T A C G T A C G T A C G T A C G T

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.58
Offset:5
Orientation:forward strand
Alignment:SAAAYATTTGCWRRYC
-----ATTTGCATAA-
 A T G C C G T A C G T A C G T A A G T C C G T A A C G T A C G T A C G T A C T G A G T C G C A T C T G A C T A G A G C T A G T C
A C G T A C G T A C G T A C G T A C G T C G T A A C G T A G C T C G A T C T A G G T A C C G T A A G C T C G T A G C T A A C G T

OLIG1/MA0826.1/Jaspar

Match Rank:7
Score:0.56
Offset:2
Orientation:forward strand
Alignment:SAAAYATTTGCWRRYC
--AACATATGTT----
 A T G C C G T A C G T A C G T A A G T C C G T A A C G T A C G T A C G T A C T G A G T C G C A T C T G A C T A G A G C T A G T C
A C G T A C G T T C G A T G C A G T A C C T G A A C G T T G C A G C A T A C T G A C G T G A C T A C G T A C G T A C G T A C G T

BHLHE22/MA0818.1/Jaspar

Match Rank:8
Score:0.55
Offset:2
Orientation:forward strand
Alignment:SAAAYATTTGCWRRYC
--ACCATATGTT----
 A T G C C G T A C G T A C G T A A G T C C G T A A C G T A C G T A C G T A C T G A G T C G C A T C T G A C T A G A G C T A G T C
A C G T A C G T T C G A T G A C G T A C C T G A A G C T G T C A G A C T A C T G A G C T G A C T A C G T A C G T A C G T A C G T

POU3F4/MA0789.1/Jaspar

Match Rank:9
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:SAAAYATTTGCWRRYC
-----ATTTGCATA--
 A T G C C G T A C G T A C G T A A G T C C G T A A C G T A C G T A C G T A C T G A G T C G C A T C T G A C T A G A G C T A G T C
A C G T A C G T A C G T A C G T A C G T G C T A G C A T C G A T G C A T T C A G G T A C C G T A G A C T C G T A A C G T A C G T

PB0145.1_Mafb_2/Jaspar

Match Rank:10
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:SAAAYATTTGCWRRYC
-ANATTTTTGCAANTN
 A T G C C G T A C G T A C G T A A G T C C G T A A C G T A C G T A C G T A C T G A G T C G C A T C T G A C T A G A G C T A G T C
A C G T C G T A G A C T C G T A C G A T G C A T C G A T G C A T A G C T C T A G T A G C T G C A T G C A G C A T A G C T C A T G