Information for 14-TYYCCMCWCTGAG (Motif 24)

A C G T A G C T A G C T A G T C A G T C G T C A A G T C C G T A A G T C A C G T A C T G C G T A A C T G
Reverse Opposite:
A G T C A C G T G T A C C G T A A C T G C G A T A C T G A C G T C T A G A C T G C T G A T C G A C G T A
p-value:1e-8
log p-value:-1.952e+01
Information Content per bp:1.871
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.59%
Number of Background Sequences with motif3.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets46.2 +/- 24.6bp
Average Position of motif in Background56.7 +/- 19.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:1
Score:0.64
Offset:4
Orientation:forward strand
Alignment:TYYCCMCWCTGAG-
----CCTGCTGAGH
 A C G T A G C T A G C T A G T C A G T C G T C A A G T C C G T A A G T C A C G T A C T G C G T A A C T G A C G T
A C G T A C G T A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A

PB0114.1_Egr1_2/Jaspar

Match Rank:2
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---TYYCCMCWCTGAG
NNAGTCCCACTCNNNN
 A C G T A C G T A C G T A C G T A G C T A G C T A G T C A G T C G T C A A G T C C G T A A G T C A C G T A C T G C G T A A C T G
T G A C G A T C C G T A C T A G G C A T G T A C G A T C G A T C G T C A A G T C A G C T G A T C T A G C C T A G T G A C T G C A

PB0206.1_Zic2_2/Jaspar

Match Rank:3
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:TYYCCMCWCTGAG---
-TCNCCTGCTGNGNNN
 A C G T A G C T A G C T A G T C A G T C G T C A A G T C C G T A A G T C A C G T A C T G C G T A A C T G A C G T A C G T A C G T
A C G T G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:4
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:TYYCCMCWCTGAG
-CCCCCTGCTGTG
 A C G T A G C T A G C T A G T C A G T C G T C A A G T C C G T A A G T C A C G T A C T G C G T A A C T G
A C G T G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G

ZIC3/MA0697.1/Jaspar

Match Rank:5
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-TYYCCMCWCTGAG-
GACCCCCCGCTGCGC
 A C G T A C G T A G C T A G C T A G T C A G T C G T C A A G T C C G T A A G T C A C G T A C T G C G T A A C T G A C G T
A C T G T C G A G T A C G A T C G T A C A G T C A G T C A G T C T C A G A G T C A C G T C A T G G A T C C A T G G T A C

ZIC1/MA0696.1/Jaspar

Match Rank:6
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-TYYCCMCWCTGAG
GACCCCCCGCTGTG
 A C G T A C G T A G C T A G C T A G T C A G T C G T C A A G T C C G T A A G T C A C G T A C T G C G T A A C T G
A C T G T C G A G T A C G T A C G T A C A G T C G T A C G A T C T C A G A G T C A C G T T C A G G A C T A C T G

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:7
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-TYYCCMCWCTGAG-
GGCCYCCTGCTGDGH
 A C G T A C G T A G C T A G C T A G T C A G T C G T C A A G T C C G T A A G T C A C G T A C T G C G T A A C T G A C G T
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

ZIC4/MA0751.1/Jaspar

Match Rank:8
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-TYYCCMCWCTGAG-
GACCCCCCGCTGTGC
 A C G T A C G T A G C T A G C T A G T C A G T C G T C A A G T C C G T A A G T C A C G T A C T G C G T A A C T G A C G T
A C T G T C G A G T A C G T A C G T A C G T A C G T A C G A T C C T A G A G T C C A G T C T A G G A C T A C T G G T A C

PB0205.1_Zic1_2/Jaspar

Match Rank:9
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:TYYCCMCWCTGAG---
-TNTCCTGCTGTGNNG
 A C G T A G C T A G C T A G T C A G T C G T C A A G T C C G T A A G T C A C G T A C T G C G T A A C T G A C G T A C G T A C G T
A C G T G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G

PB0207.1_Zic3_2/Jaspar

Match Rank:10
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:TYYCCMCWCTGAG---
-NNTCCTGCTGTGNNN
 A C G T A G C T A G C T A G T C A G T C G T C A A G T C C G T A A G T C A C G T A C T G C G T A A C T G A C G T A C G T A C G T
A C G T G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C