Information for 9-HCCTGAGGAVAAC (Motif 13)

G A C T A G T C A G T C A C G T A C T G C G T A A C T G C T A G C G T A T G A C C G T A C G T A A G T C
Reverse Opposite:
A C T G A C G T A C G T A C G T A C G T A G T C A G T C A C G T A G T C C G T A A C T G A C T G C A G T
p-value:1e-10
log p-value:-2.498e+01
Information Content per bp:1.875
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.59%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets48.4 +/- 26.0bp
Average Position of motif in Background69.9 +/- 2.7bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:1
Score:0.62
Offset:0
Orientation:forward strand
Alignment:HCCTGAGGAVAAC
SCCTSAGGSCAW-
 G A C T A G T C A G T C A C G T A C T G C G T A A C T G C T A G C G T A T G A C C G T A C G T A A G T C
A T C G A G T C A G T C G A C T A T G C C T G A C T A G A C T G T A C G G T A C C T G A C G A T A C G T

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:HCCTGAGGAVAAC
GCCTCAGGGCAT-
 G A C T A G T C A G T C A C G T A C T G C G T A A C T G C T A G C G T A T G A C C G T A C G T A A G T C
A T C G A G T C A G T C A G C T A T G C C T G A C T A G A C T G A T C G G T A C G C T A C G A T A C G T

PB0087.1_Tcfap2c_1/Jaspar

Match Rank:3
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---HCCTGAGGAVAAC
ATTGCCTGAGGCGAA-
 A C G T A C G T A C G T G A C T A G T C A G T C A C G T A C T G C G T A A C T G C T A G C G T A T G A C C G T A C G T A A G T C
C G T A G C A T G A C T A T C G G T A C A G T C A G C T A T C G T C G A C T A G A C T G T A G C C T A G G C T A C G T A A C G T

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:4
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---HCCTGAGGAVAAC
ATTGCCTGAGGCAAT-
 A C G T A C G T A C G T G A C T A G T C A G T C A C G T A C T G C G T A A C T G C T A G C G T A T G A C C G T A C G T A A G T C
G C T A G C A T G C A T A T C G A G T C A G T C A G C T A T C G T C G A T C A G A C T G T A G C C T A G G C T A C G A T A C G T

PB0085.1_Tcfap2a_1/Jaspar

Match Rank:5
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---HCCTGAGGAVAAC
ATTCCCTGAGGGGAA-
 A C G T A C G T A C G T G A C T A G T C A G T C A C G T A C T G C G T A A C T G C T A G C G T A T G A C C G T A C G T A A G T C
C G T A C G A T G A C T A T G C G T A C A G T C A G C T A T C G T C G A C T A G A C T G T A C G C T A G C G T A C T G A A C G T

SA0002.1_at_AC_acceptor/Jaspar

Match Rank:6
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-HCCTGAGGAVAAC------
NNCCTGNAAAAAAAAAAAAA
 A C G T G A C T A G T C A G T C A C G T A C T G C G T A A C T G C T A G C G T A T G A C C G T A C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
G C T A C G T A A G T C A G T C A C G T C T A G C T G A C T G A C T G A C T G A C T G A T C G A T C G A T C G A T C G A C T G A C T G A C T G A T C G A C T G A

SA0001.1_at_AC_acceptor/Jaspar

Match Rank:7
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-HCCTGAGGAVAAC------
NNCCTGNAAAAAAAAAAAAA
 A C G T G A C T A G T C A G T C A C G T A C T G C G T A A C T G C T A G C G T A T G A C C G T A C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
G C T A G C T A A G T C A G T C A C G T C T A G C T G A C T G A C T G A C T G A C T G A T C G A T C G A T C G A T C G A T C G A T C G A T C G A C T G A C T G A

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:8
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:HCCTGAGGAVAAC
-CSTGGGAAAD--
 G A C T A G T C A G T C A C G T A C T G C G T A A C T G C T A G C G T A T G A C C G T A C G T A A G T C
A C G T A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A A C G T A C G T

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---HCCTGAGGAVAAC
GTCCCCAGGGGA----
 A C G T A C G T A C G T G A C T A G T C A G T C A C G T A C T G C G T A A C T G C T A G C G T A T G A C C G T A C G T A A G T C
C A T G A C G T A G T C G A T C G A T C G A T C G C T A C T A G C T A G C T A G T C A G T C G A A C G T A C G T A C G T A C G T

STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer

Match Rank:10
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-HCCTGAGGAVAAC
TTCCKNAGAA----
 A C G T G A C T A G T C A G T C A C G T A C T G C G T A A C T G C T A G C G T A T G A C C G T A C G T A A G T C
G A C T C A G T G A T C G A T C A C G T G A T C C T G A T A C G C G T A G T C A A C G T A C G T A C G T A C G T