Information for 8-CCACAGGCAGGTC (Motif 12)

G T A C A G T C C G T A A G T C C G T A A C T G A C T G A G T C C G T A A C T G A C T G A C G T A G T C
Reverse Opposite:
A C T G G T C A A G T C A G T C A C G T A C T G A G T C G T A C A C G T A C T G A C G T A C T G A C T G
p-value:1e-10
log p-value:-2.498e+01
Information Content per bp:1.924
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.59%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets43.0 +/- 32.0bp
Average Position of motif in Background42.7 +/- 21.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.64
Offset:3
Orientation:forward strand
Alignment:CCACAGGCAGGTC-
---AAGGCAAGTGT
 G T A C A G T C C G T A A G T C C G T A A C T G A C T G A G T C C G T A A C T G A C T G A C G T A G T C A C G T
A C G T A C G T A C G T T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T

RUNX1/MA0002.2/Jaspar

Match Rank:2
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---CCACAGGCAGGTC
AAACCACAGAN-----
 A C G T A C G T A C G T G T A C A G T C C G T A A G T C C G T A A C T G A C T G A G T C C G T A A C T G A C T G A C G T A G T C
G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C A C G T A C G T A C G T A C G T A C G T

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:3
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CCACAGGCAGGTC
AGCCTCAGGCA----
 A C G T A C G T G T A C A G T C C G T A A G T C C G T A A C T G A C T G A G T C C G T A A C T G A C T G A C G T A G T C
G T C A T A C G A T G C A G T C A G C T T A G C T G C A T C A G T A C G T A G C C G T A A C G T A C G T A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:4
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----CCACAGGCAGGTC
NWAACCACADNN-----
 A C G T A C G T A C G T A C G T G T A C A G T C C G T A A G T C C G T A A C T G A C T G A G T C C G T A A C T G A C T G A C G T A G T C
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C A C G T A C G T A C G T A C G T A C G T

TFAP2A/MA0003.3/Jaspar

Match Rank:5
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CCACAGGCAGGTC
CGCCTCAGGCA----
 A C G T A C G T G T A C A G T C C G T A A G T C C G T A A C T G A C T G A G T C C G T A A C T G A C T G A C G T A G T C
G T A C T A C G A T G C A G T C A G C T T A G C T G C A T C A G A T C G T A G C C G T A A C G T A C G T A C G T A C G T

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:6
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CCACAGGCAGGTC
-AACAGGAAGT--
 G T A C A G T C C G T A A G T C C G T A A C T G A C T G A G T C C G T A A C T G A C T G A C G T A G T C
A C G T T G C A C T G A A T G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T A C G T A C G T

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:7
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CCACAGGCAGGTC
AGCCTCAGGCA----
 A C G T A C G T G T A C A G T C C G T A A G T C C G T A A C T G A C T G A G T C C G T A A C T G A C T G A C G T A G T C
G T C A T A C G A T G C A G T C A G C T T A G C T C G A T C A G A T C G T A G C C G T A A C G T A C G T A C G T A C G T

SNAI2/MA0745.1/Jaspar

Match Rank:8
Score:0.56
Offset:5
Orientation:forward strand
Alignment:CCACAGGCAGGTC-
-----AACAGGTGT
 G T A C A G T C C G T A A G T C C G T A A C T G A C T G A G T C C G T A A C T G A C T G A C G T A G T C A C G T
A C G T A C G T A C G T A C G T A C G T C T G A C T G A G T A C G C T A C T A G C T A G G A C T C A T G A G C T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:9
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---CCACAGGCAGGTC
AAACCACAGC------
 A C G T A C G T A C G T G T A C A G T C C G T A A G T C C G T A A C T G A C T G A G T C C G T A A C T G A C T G A C G T A G T C
G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C A C G T A C G T A C G T A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:10
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CCACAGGCAGGTC
-CACAGN------
 G T A C A G T C C G T A A G T C C G T A A C T G A C T G A G T C C G T A A C T G A C T G A C G T A G T C
A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T