Information for 5-GGCCGGGCAGGCCCCR (Motif 9)

C A T G A T C G A T G C A T G C A C T G A C T G A T C G T G A C T C G A C T A G C T A G A G T C G T A C A T G C A G T C C T A G
Reverse Opposite:
G A T C A C T G A T C G A C T G A C T G A G T C G A T C A G C T A C T G A T G C G T A C G T A C A T C G A T C G A T G C G A T C
p-value:1e-11
log p-value:-2.567e+01
Information Content per bp:1.706
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.17%
Number of Background Sequences with motif15.7
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets55.4 +/- 27.3bp
Average Position of motif in Background63.4 +/- 28.2bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:1
Score:0.60
Offset:3
Orientation:forward strand
Alignment:GGCCGGGCAGGCCCCR
---GGGGGAATCCCC-
 C A T G A T C G A T G C A T G C A C T G A C T G A T C G T G A C T C G A C T A G C T A G A G T C G T A C A T G C A G T C C T A G
A C G T A C G T A C G T T C A G C T A G C T A G C T A G T C A G T C G A C T G A C G A T A G T C G A T C A G T C T G A C A C G T

Sp1(Zf)/Promoter/Homer

Match Rank:2
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:GGCCGGGCAGGCCCCR
--GGGGGCGGGGCC--
 C A T G A T C G A T G C A T G C A C T G A C T G A T C G T G A C T C G A C T A G C T A G A G T C G T A C A T G C A G T C C T A G
A C G T A C G T T C A G C A T G C T A G A C T G A C T G A G T C A C T G A C T G C T A G T A C G A G T C A T G C A C G T A C G T

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:3
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:GGCCGGGCAGGCCCCR
----GGGAAATCCCCN
 C A T G A T C G A T G C A T G C A C T G A C T G A T C G T G A C T C G A C T A G C T A G A G T C G T A C A T G C A G T C C T A G
A C G T A C G T A C G T A C G T C A T G C T A G C T A G C T G A G C T A C G T A A G C T G A T C G T A C G T A C G T A C G C A T

NFKB2/MA0778.1/Jaspar

Match Rank:4
Score:0.57
Offset:3
Orientation:forward strand
Alignment:GGCCGGGCAGGCCCCR
---AGGGGATTCCCCT
 C A T G A T C G A T G C A T G C A C T G A C T G A T C G T G A C T C G A C T A G C T A G A G T C G T A C A T G C A G T C C T A G
A C G T A C G T A C G T T G C A T C A G A C T G C A T G C T A G T G C A G C A T G A C T G A T C G T A C G A T C G A T C A G C T

PB0052.1_Plagl1_1/Jaspar

Match Rank:5
Score:0.57
Offset:2
Orientation:forward strand
Alignment:GGCCGGGCAGGCCCCR--
--TTGGGGGCGCCCCTAG
 C A T G A T C G A T G C A T G C A C T G A C T G A T C G T G A C T C G A C T A G C T A G A G T C G T A C A T G C A G T C C T A G A C G T A C G T
A C G T A C G T A C G T G A C T C T A G C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C A C G T T C G A T A C G

ZNF692(Zf)/HEK293-ZNF692.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.57
Offset:6
Orientation:forward strand
Alignment:GGCCGGGCAGGCCCCR
------GTGGGCCCCA
 C A T G A T C G A T G C A T G C A C T G A C T G A T C G T G A C T C G A C T A G C T A G A G T C G T A C A T G C A G T C C T A G
A C G T A C G T A C G T A C G T A C G T A C G T T A C G G A C T A C T G A C T G C T A G A T G C A G T C A G T C A G T C C T G A

POL011.1_XCPE1/Jaspar

Match Rank:7
Score:0.57
Offset:4
Orientation:forward strand
Alignment:GGCCGGGCAGGCCCCR
----GGGCGGGACC--
 C A T G A T C G A T G C A T G C A C T G A C T G A T C G T G A C T C G A C T A G C T A G A G T C G T A C A T G C A G T C C T A G
A C G T A C G T A C G T A C G T A C T G A T C G A C T G A G T C A C T G A C T G C T A G C G T A A T G C G T A C A C G T A C G T

MF0003.1_REL_class/Jaspar

Match Rank:8
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:GGCCGGGCAGGCCCCR
-----GGAAATCCCC-
 C A T G A T C G A T G C A T G C A C T G A C T G A T C G T G A C T C G A C T A G C T A G A G T C G T A C A T G C A G T C C T A G
A C G T A C G T A C G T A C G T A C G T C A T G C T A G C T G A T C G A G C T A C G A T G A T C G T A C T G A C T A G C A C G T

REL/MA0101.1/Jaspar

Match Rank:9
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:GGCCGGGCAGGCCCCR
-----GGAAANCCCC-
 C A T G A T C G A T G C A T G C A C T G A C T G A T C G T G A C T C G A C T A G C T A G A G T C G T A C A T G C A G T C C T A G
A C G T A C G T A C G T A C G T A C G T A C T G C T A G C G T A C G T A C G T A A C G T G A T C G A T C T A G C T A G C A C G T

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--GGCCGGGCAGGCCCCR
ATGCCCGGGCATGT----
 A C G T A C G T C A T G A T C G A T G C A T G C A C T G A C T G A T C G T G A C T C G A C T A G C T A G A G T C G T A C A T G C A G T C C T A G
G T C A C G A T A C T G A G T C A G T C G A T C C T A G C T A G T C A G A T G C G C T A C G A T A T C G G A C T A C G T A C G T A C G T A C G T