Information for 10-CCCYCTGGTG (Motif 8)

A G T C G A T C G T A C A G T C T G A C G A C T C A T G T A C G C G A T A T C G
Reverse Opposite:
T A G C G C T A A T G C G T A C C T G A A C T G T C A G C A T G C T A G T C A G
p-value:1e-12
log p-value:-2.822e+01
Information Content per bp:1.649
Number of Target Sequences with motif44.0
Percentage of Target Sequences with motif5.71%
Number of Background Sequences with motif733.4
Percentage of Background Sequences with motif1.57%
Average Position of motif in Targets46.9 +/- 25.4bp
Average Position of motif in Background51.4 +/- 29.2bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.81
Offset:-8
Orientation:forward strand
Alignment:--------CCCYCTGGTG--
CNNBRGCGCCCCCTGSTGGC
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C G A T C G T A C A G T C T G A C G A C T C A T G T A C G C G A T A T C G A C G T A C G T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

CTCF/MA0139.1/Jaspar

Match Rank:2
Score:0.80
Offset:-5
Orientation:reverse strand
Alignment:-----CCCYCTGGTG----
TAGCGCCCCCTGGTGGCCA
A C G T A C G T A C G T A C G T A C G T A G T C G A T C G T A C A G T C T G A C G A C T C A T G T A C G C G A T A T C G A C G T A C G T A C G T A C G T
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:3
Score:0.79
Offset:-6
Orientation:forward strand
Alignment:------CCCYCTGGTG----
ANAGTGCCACCTGGTGGCCA
A C G T A C G T A C G T A C G T A C G T A C G T A G T C G A T C G T A C A G T C T G A C G A C T C A T G T A C G C G A T A T C G A C G T A C G T A C G T A C G T
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:4
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:CCCYCTGGTG--
CCCCCTGCTGTG
A G T C G A T C G T A C A G T C T G A C G A C T C A T G T A C G C G A T A T C G A C G T A C G T
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G

ZIC1/MA0696.1/Jaspar

Match Rank:5
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--CCCYCTGGTG--
GACCCCCCGCTGTG
A C G T A C G T A G T C G A T C G T A C A G T C T G A C G A C T C A T G T A C G C G A T A T C G A C G T A C G T
A C T G T C G A G T A C G T A C G T A C A G T C G T A C G A T C T C A G A G T C A C G T T C A G G A C T A C T G

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:6
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--CCCYCTGGTG---
GGCCYCCTGCTGDGH
A C G T A C G T A G T C G A T C G T A C A G T C T G A C G A C T C A T G T A C G C G A T A T C G A C G T A C G T A C G T
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

ZIC4/MA0751.1/Jaspar

Match Rank:7
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--CCCYCTGGTG---
GACCCCCCGCTGTGC
A C G T A C G T A G T C G A T C G T A C A G T C T G A C G A C T C A T G T A C G C G A T A T C G A C G T A C G T A C G T
A C T G T C G A G T A C G T A C G T A C G T A C G T A C G A T C C T A G A G T C C A G T C T A G G A C T A C T G G T A C

ZIC3/MA0697.1/Jaspar

Match Rank:8
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--CCCYCTGGTG---
GACCCCCCGCTGCGC
A C G T A C G T A G T C G A T C G T A C A G T C T G A C G A C T C A T G T A C G C G A T A T C G A C G T A C G T A C G T
A C T G T C G A G T A C G A T C G T A C A G T C A G T C A G T C T C A G A G T C A C G T C A T G G A T C C A T G G T A C

PB0102.1_Zic2_1/Jaspar

Match Rank:9
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--CCCYCTGGTG---
CCCCCCCGGGGGGGT
A C G T A C G T A G T C G A T C G T A C A G T C T G A C G A C T C A T G T A C G C G A T A T C G A C G T A C G T A C G T
A T G C G T A C G T A C G T A C G T A C A T G C T A G C A C T G A T C G A C T G C A T G C A T G C A T G A T C G A C G T

PB0103.1_Zic3_1/Jaspar

Match Rank:10
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CCCYCTGGTG---
CCCCCCCGGGGGGGT
A C G T A C G T A G T C G A T C G T A C A G T C T G A C G A C T C A T G T A C G C G A T A T C G A C G T A C G T A C G T
A T G C G T A C G T A C G T A C G T A C A T G C T A G C A C T G T A C G A C T G C A T G C A T G C A T G A T C G A G C T