Information for 9-TTTACTTAMTAGT (Motif 13)

A C G T A C G T A C G T C G T A A G T C A C G T A C G T C G T A G T C A A C G T C T G A A C T G A C G T
Reverse Opposite:
C G T A A G T C A G C T C G T A A C G T C G A T C G T A C G T A A C T G A C G T C G T A C G T A T G C A
p-value:1e-8
log p-value:-2.058e+01
Information Content per bp:1.914
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.78%
Number of Background Sequences with motif6.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets73.2 +/- 17.6bp
Average Position of motif in Background64.5 +/- 40.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:1
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--TTTACTTAMTAGT
TGTTTACTTT-----
 A C G T A C G T A C G T A C G T A C G T C G T A A G T C A C G T A C G T C G T A G T C A A C G T C T G A A C T G A C G T
A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T A C G T A C G T A C G T A C G T A C G T

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:2
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--TTTACTTAMTAGT
TGTTTACTTT-----
 A C G T A C G T A C G T A C G T A C G T C G T A A G T C A C G T A C G T C G T A G T C A A C G T C T G A A C T G A C G T
A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T A C G T A C G T A C G T A C G T A C G T

PH0095.1_Lhx5/Jaspar

Match Rank:3
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----TTTACTTAMTAGT
ANNATTTAATTAATTNN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C A C G T A C G T C G T A G T C A A C G T C T G A A C T G A C G T
T C G A C A T G C A G T C G T A C G A T G A C T G A C T T C G A C G T A C G A T A C G T C T G A C T G A G A C T C A G T G A T C A T C G

PH0093.1_Lhx3/Jaspar

Match Rank:4
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----TTTACTTAMTAGT
NNTATTTAATTAATTNN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C A C G T A C G T C G T A G T C A A C G T C T G A A C T G A C G T
T G C A C A G T C A G T G C T A G C A T G A C T G A C T C T G A C G T A C G A T A G C T C T G A C T G A A G C T C A G T G C A T A T G C

PH0101.1_Lmx1b/Jaspar

Match Rank:5
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----TTTACTTAMTAGT
AGTTTTTAATTAATTTG
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C A C G T A C G T C G T A G T C A A C G T C T G A A C T G A C G T
T C G A C T A G C G A T C G A T G C A T A G C T G A C T G C T A C G T A G C A T C G A T C G T A C T G A C G A T C G A T G A C T A C T G

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:6
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--TTTACTTAMTAGT
TRTTTACTTW-----
 A C G T A C G T A C G T A C G T A C G T C G T A A G T C A C G T A C G T C G T A G T C A A C G T C T G A A C T G A C G T
A C G T C T A G A G C T A C G T A C G T C T G A A G T C G A C T A G C T C G T A A C G T A C G T A C G T A C G T A C G T

PH0091.1_Lhx1/Jaspar

Match Rank:7
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----TTTACTTAMTAGT
NNTTATTAATTAATNCN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C A C G T A C G T C G T A G T C A A C G T C T G A A C T G A C G T
T G A C C T G A C G A T C G A T C G T A G A C T G A C T T C G A C G T A C G A T A C G T C T G A C T G A G A C T G C A T A G T C A C T G

FOXC1/MA0032.2/Jaspar

Match Rank:8
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---TTTACTTAMTAGT
ATATTTACATA-----
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C A C G T A C G T C G T A G T C A A C G T C T G A A C T G A C G T
C G T A G A C T T C G A G A C T C A G T C A G T C G T A A G T C G C T A G A C T C G T A A C G T A C G T A C G T A C G T A C G T

PH0011.1_Alx1_2/Jaspar

Match Rank:9
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---TTTACTTAMTAGT-
CGCATTAATTAATTGGC
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C A C G T A C G T C G T A G T C A A C G T C T G A A C T G A C G T A C G T
A G T C T C A G G T A C C T G A G A C T G A C T C T G A C G T A G A C T A G C T C T G A C T G A A G C T A G C T C T A G C T A G T G A C

PH0173.1_Uncx/Jaspar

Match Rank:10
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---TTTACTTAMTAGT-
CNCNTTAATTAATTANN
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C A C G T A C G T C G T A G T C A A C G T C T G A A C T G A C G T A C G T
T G A C A T C G A G T C T C A G A G C T G A C T T C G A C G T A G A C T A C G T C T G A C T G A A C G T A G C T C G T A A G C T A C T G