Information for 4-AAAACAAAGTTCATTT (Motif 6)

C G T A C T G A C T G A G T C A A T G C C G T A C G T A C G T A A C T G C A G T A C G T G T A C C G T A G C A T C G A T A C G T
Reverse Opposite:
T G C A C G T A C G T A A C G T A C T G C G T A G T C A G T A C A C G T A C G T A C G T A T C G A C G T A G C T A G C T C G A T
p-value:1e-16
log p-value:-3.823e+01
Information Content per bp:1.765
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.28%
Number of Background Sequences with motif6.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets52.3 +/- 24.3bp
Average Position of motif in Background49.8 +/- 20.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox3/MA0514.1/Jaspar

Match Rank:1
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:AAAACAAAGTTCATTT
AAAACAAAGG------
 C G T A C T G A C T G A G T C A A T G C C G T A C G T A C G T A A C T G C A G T A C G T G T A C C G T A G C A T C G A T A C G T
T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T

PB0061.1_Sox11_1/Jaspar

Match Rank:2
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---AAAACAAAGTTCATTT
ATAAGAACAAAGGACTA--
 A C G T A C G T A C G T C G T A C T G A C T G A G T C A A T G C C G T A C G T A C G T A A C T G C A G T A C G T G T A C C G T A G C A T C G A T A C G T
G C T A A C G T C G T A C G T A C T A G T C G A C G T A A G T C C G T A G T C A C G T A C T A G T C A G T C G A A G T C G C A T G C T A A C G T A C G T

PB0071.1_Sox4_1/Jaspar

Match Rank:3
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---AAAACAAAGTTCATTT
AGAAGAACAAAGGACTA--
 A C G T A C G T A C G T C G T A C T G A C T G A G T C A A T G C C G T A C G T A C G T A A C T G C A G T A C G T G T A C C G T A G C A T C G A T A C G T
G T C A A C T G C T G A C G T A C T A G T C G A C G T A A G T C C G T A C G T A C G T A C T A G T C A G T C G A A G T C G C A T G C T A A C G T A C G T

FOXP1/MA0481.1/Jaspar

Match Rank:4
Score:0.64
Offset:-6
Orientation:forward strand
Alignment:------AAAACAAAGTTCATTT
CAAAAGTAAACAAAG-------
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C T G A C T G A G T C A A T G C C G T A C G T A C G T A A C T G C A G T A C G T G T A C C G T A G C A T C G A T A C G T
G T A C G C T A C G T A T C G A C T G A T C A G G C A T C G T A C G T A C G T A T G A C C G T A T G C A C G T A T C A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

HNF4G/MA0484.1/Jaspar

Match Rank:5
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--AAAACAAAGTTCATTT
AGAGTCCAAAGTCCA---
 A C G T A C G T C G T A C T G A C T G A G T C A A T G C C G T A C G T A C G T A A C T G C A G T A C G T G T A C C G T A G C A T C G A T A C G T
C G T A T C A G C T G A C T A G C A G T A G T C A G T C T G C A T C G A C T G A C A T G C A G T A G T C G A T C G C T A A C G T A C G T A C G T

Sox6/MA0515.1/Jaspar

Match Rank:6
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:AAAACAAAGTTCATTT
AAAACAATGG------
 C G T A C T G A C T G A G T C A A T G C C G T A C G T A C G T A A C T G C A G T A C G T G T A C C G T A G C A T C G A T A C G T
T C G A C T G A T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G A C G T A C G T A C G T A C G T A C G T A C G T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:7
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---AAAACAAAGTTCATTT
CANAGNNCAAAGTCCA---
 A C G T A C G T A C G T C G T A C T G A C T G A G T C A A T G C C G T A C G T A C G T A A C T G C A G T A C G T G T A C C G T A G C A T C G A T A C G T
G T A C G C T A T C A G C T G A C T A G C A T G A G C T G A T C T G C A T C G A C T G A A C T G C A G T A G T C G A T C G C T A A C G T A C G T A C G T

SRY/MA0084.1/Jaspar

Match Rank:8
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-AAAACAAAGTTCATTT
GTAAACAAT--------
 A C G T C G T A C T G A C T G A G T C A A T G C C G T A C G T A C G T A A C T G C A G T A C G T G T A C C G T A G C A T C G A T A C G T
A C T G C G A T C G T A C G T A C G T A A G T C C G T A C T G A C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:9
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:AAAACAAAGTTCATTT
GGAACAAAGR------
 C G T A C T G A C T G A G T C A A T G C C G T A C G T A C G T A A C T G C A G T A C G T G T A C C G T A G C A T C G A T A C G T
T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G A C G T A C G T A C G T A C G T A C G T A C G T

PB0016.1_Foxj1_1/Jaspar

Match Rank:10
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----AAAACAAAGTTCATTT
AAAGTAAACAAAAATT----
 A C G T A C G T A C G T A C G T C G T A C T G A C T G A G T C A A T G C C G T A C G T A C G T A A C T G C A G T A C G T G T A C C G T A G C A T C G A T A C G T
G C T A C G A T G C T A C T A G G A C T G T C A G C T A C G T A G A T C C G T A G T C A C G T A G T C A C G T A C A G T C A G T A C G T A C G T A C G T A C G T