Information for 5-TCACAGCAGMCTGBTG (Motif 11)

C G A T T G A C C T G A G T A C C G T A T A C G A G T C C G T A A C T G T G A C A G T C A C G T A C T G A G C T C A G T A C T G
Reverse Opposite:
A G T C G C T A T C A G A G T C C G T A A C T G A C T G A G T C A C G T A C T G A T G C C G A T A C T G A G C T A C T G C G T A
p-value:1e-10
log p-value:-2.526e+01
Information Content per bp:1.769
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.64%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets43.5 +/- 28.5bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:1
Score:0.61
Offset:5
Orientation:reverse strand
Alignment:TCACAGCAGMCTGBTG
-----BCAGACWA---
 C G A T T G A C C T G A G T A C C G T A T A C G A G T C C G T A A C T G T G A C A G T C A C G T A C T G A G C T C A G T A C T G
A C G T A C G T A C G T A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:TCACAGCAGMCTGBTG
-----CCAGACAG---
 C G A T T G A C C T G A G T A C C G T A T A C G A G T C C G T A A C T G T G A C A G T C A C G T A C T G A G C T C A G T A C T G
A C G T A C G T A C G T A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:TCACAGCAGMCTGBTG
-----CCAGACRSVB-
 C G A T T G A C C T G A G T A C C G T A T A C G A G T C C G T A A C T G T G A C A G T C A C G T A C T G A G C T C A G T A C T G
A C G T A C G T A C G T A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:4
Score:0.56
Offset:1
Orientation:forward strand
Alignment:TCACAGCAGMCTGBTG
-CACAGCAGGGGG---
 C G A T T G A C C T G A G T A C C G T A T A C G A G T C C G T A A C T G T G A C A G T C A C G T A C T G A G C T C A G T A C T G
A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G A C G T A C G T A C G T

ZNF317(Zf)/HEK293-ZNF317.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----TCACAGCAGMCTGBTG
AGAGRRACAGCWGAC-----
 A C G T A C G T A C G T A C G T C G A T T G A C C T G A G T A C C G T A T A C G A G T C C G T A A C T G T G A C A G T C A C G T A C T G A G C T C A G T A C T G
T C G A C T A G C G T A C T A G C T G A T C A G C G T A A G T C C G T A T C A G T G A C G C A T A C T G C G T A A G T C A C G T A C G T A C G T A C G T A C G T

SOX8/MA0868.1/Jaspar

Match Rank:6
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-TCACAGCAGMCTGBTG
AACACTGCACATTGTT-
 A C G T C G A T T G A C C T G A G T A C C G T A T A C G A G T C C G T A A C T G T G A C A G T C A C G T A C T G A G C T C A G T A C T G
C T G A C G T A A G T C G T C A G T A C A C G T T A C G T G A C C G T A G A T C G T C A A C G T A G C T A C T G A C G T C G A T A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:7
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--TCACAGCAGMCTGBTG
CCACACAGCAGGAGA---
 A C G T A C G T C G A T T G A C C T G A G T A C C G T A T A C G A G T C C G T A A C T G T G A C A G T C A C G T A C T G A G C T C A G T A C T G
A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A A C G T A C G T A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:8
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--TCACAGCAGMCTGBTG
GAGCACAGCAGGACA---
 A C G T A C G T C G A T T G A C C T G A G T A C C G T A T A C G A G T C C G T A A C T G T G A C A G T C A C G T A C T G A G C T C A G T A C T G
C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:9
Score:0.52
Offset:9
Orientation:forward strand
Alignment:TCACAGCAGMCTGBTG
---------GCTGTG-
 C G A T T G A C C T G A G T A C C G T A T A C G A G T C C G T A A C T G T G A C A G T C A C G T A C T G A G C T C A G T A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:10
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:TCACAGCAGMCTGBTG
DCHCAGCAGGRGGCC-
 C G A T T G A C C T G A G T A C C G T A T A C G A G T C C G T A A C T G T G A C A G T C A C G T A C T G A G C T C A G T A C T G
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C A C G T