Information for 1-NNNNMWRWGTAAACAA (Motif 1)

C G T A C A G T G A T C C T G A G T A C G C A T C T G A C G T A C T A G A G C T G T C A G T C A C T G A A G T C C G T A C T G A
Reverse Opposite:
G A C T C G A T C T A G A G C T A C G T A C G T C T G A G A T C G C A T G A C T C G T A C A T G G A C T C T A G G T C A G C A T
p-value:1e-215
log p-value:-4.956e+02
Information Content per bp:1.572
Number of Target Sequences with motif363.0
Percentage of Target Sequences with motif46.30%
Number of Background Sequences with motif2928.9
Percentage of Background Sequences with motif6.26%
Average Position of motif in Targets51.9 +/- 19.3bp
Average Position of motif in Background50.6 +/- 30.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.98
Offset:5
Orientation:forward strand
Alignment:NNNNMWRWGTAAACAA
-----AAAGTAAACA-
 C G T A C A G T G A T C C T G A G T A C G C A T C T G A C G T A C T A G A G C T G T C A G T C A C T G A A G T C C G T A C T G A
A C G T A C G T A C G T A C G T A C G T G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A A C G T

FOXA1/MA0148.3/Jaspar

Match Rank:2
Score:0.98
Offset:4
Orientation:reverse strand
Alignment:NNNNMWRWGTAAACAA---
----CAAAGTAAACANNNN
 C G T A C A G T G A T C C T G A G T A C G C A T C T G A C G T A C T A G A G C T G T C A G T C A C T G A A G T C C G T A C T G A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G T A C G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C G C T A C G A T T A C G T C A G C T G A

Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer

Match Rank:3
Score:0.97
Offset:3
Orientation:reverse strand
Alignment:NNNNMWRWGTAAACAA--
---NCWRWGTAAACANSV
 C G T A C A G T G A T C C T G A G T A C G C A T C T G A C G T A C T A G A G C T G T C A G T C A C T G A A G T C C G T A C T G A A C G T A C G T
A C G T A C G T A C G T T G A C G A T C G C A T C T G A C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A C G T A A T C G T C A G

Foxa2/MA0047.2/Jaspar

Match Rank:4
Score:0.97
Offset:3
Orientation:reverse strand
Alignment:NNNNMWRWGTAAACAA
---NCTAAGTAAACA-
 C G T A C A G T G A T C C T G A G T A C G C A T C T G A C G T A C T A G A G C T G T C A G T C A C T G A A G T C C G T A C T G A
A C G T A C G T A C G T T A G C G T A C G C A T T C G A C G T A C T A G A G C T G T C A T G C A C G T A A G T C C G T A A C G T

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:5
Score:0.97
Offset:5
Orientation:forward strand
Alignment:NNNNMWRWGTAAACAA
-----AAAGTAAACA-
 C G T A C A G T G A T C C T G A G T A C G C A T C T G A C G T A C T A G A G C T G T C A G T C A C T G A A G T C C G T A C T G A
A C G T A C G T A C G T A C G T A C G T G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A A C G T

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:6
Score:0.97
Offset:5
Orientation:reverse strand
Alignment:NNNNMWRWGTAAACAA-
-----TATGTAAACANG
 C G T A C A G T G A T C C T G A G T A C G C A T C T G A C G T A C T A G A G C T G T C A G T C A C T G A A G T C C G T A C T G A A C G T
A C G T A C G T A C G T A C G T A C G T G C A T T C G A C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A C T G A T A C G

FOXC2/MA0846.1/Jaspar

Match Rank:7
Score:0.96
Offset:5
Orientation:forward strand
Alignment:NNNNMWRWGTAAACAA-
-----TAAGTAAACAAA
 C G T A C A G T G A T C C T G A G T A C G C A T C T G A C G T A C T A G A G C T G T C A G T C A C T G A A G T C C G T A C T G A A C G T
A C G T A C G T A C G T A C G T A C G T G C A T C T G A G C T A T C A G G A C T G T C A G T C A C T G A A G T C C T G A G C T A G C T A

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:8
Score:0.95
Offset:5
Orientation:reverse strand
Alignment:NNNNMWRWGTAAACAA
-----WAAGTAAAYA-
 C G T A C A G T G A T C C T G A G T A C G C A T C T G A C G T A C T A G A G C T G T C A G T C A C T G A A G T C C G T A C T G A
A C G T A C G T A C G T A C G T A C G T G C A T T C G A C T G A T C A G A G C T G T C A G T C A C T G A A G T C T G C A A C G T

PB0015.1_Foxa2_1/Jaspar

Match Rank:9
Score:0.94
Offset:3
Orientation:forward strand
Alignment:NNNNMWRWGTAAACAA----
---AAAAAGTAAACAAAGAC
 C G T A C A G T G A T C C T G A G T A C G C A T C T G A C G T A C T A G A G C T G T C A G T C A C T G A A G T C C G T A C T G A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G C T A C G T A G C T A C G T A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A G C T A C G T A T A C G C T G A A G T C

FOXC1/MA0032.2/Jaspar

Match Rank:10
Score:0.93
Offset:5
Orientation:forward strand
Alignment:NNNNMWRWGTAAACAA
-----TATGTAAATAT
 C G T A C A G T G A T C C T G A G T A C G C A T C T G A C G T A C T A G A G C T G T C A G T C A C T G A A G T C C G T A C T G A
A C G T A C G T A C G T A C G T A C G T G C A T C T G A C G A T T C A G G C A T G T C A G T C A C T G A A G C T C T G A G C A T