Information for 8-ATGDCACCCTTGT (Motif 7)

C T G A A C G T A C T G C T G A A T G C C G T A A T G C A G T C A T G C A C G T C G A T A T C G A C G T
Reverse Opposite:
C G T A A T G C C G T A C G T A A T C G A C T G A T C G A C G T A T C G G A C T A G T C C G T A A G C T
p-value:1e-12
log p-value:-2.928e+01
Information Content per bp:1.847
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.85%
Number of Background Sequences with motif3.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets42.9 +/- 15.1bp
Average Position of motif in Background27.3 +/- 11.6bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0164.1_Six4/Jaspar

Match Rank:1
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----ATGDCACCCTTGT
ATAAATGACACCTATCA
 A C G T A C G T A C G T A C G T C T G A A C G T A C T G C T G A A T G C C G T A A T G C A G T C A T G C A C G T C G A T A T C G A C G T
G C T A C A G T C T G A G T C A G C T A A G C T C A T G G T C A A G T C G T C A G T A C A G T C A G C T G T C A A G C T A G T C T C G A

Sox2/MA0143.3/Jaspar

Match Rank:2
Score:0.65
Offset:6
Orientation:forward strand
Alignment:ATGDCACCCTTGT-
------CCTTTGTT
 C T G A A C G T A C T G C T G A A T G C C G T A A T G C A G T C A T G C A C G T C G A T A T C G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:3
Score:0.63
Offset:1
Orientation:forward strand
Alignment:ATGDCACCCTTGT
-AGGVNCCTTTGT
 C T G A A C G T A C T G C T G A A T G C C G T A A T G C A G T C A T G C A C G T C G A T A T C G A C G T
A C G T C G T A C T A G T C A G T C A G A G T C A T G C A G T C G C A T A G C T A C G T A T C G C G A T

PB0059.1_Six6_1/Jaspar

Match Rank:4
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----ATGDCACCCTTGT
ANANNTGATACCCNATN
 A C G T A C G T A C G T A C G T C T G A A C G T A C T G C T G A A T G C C G T A A T G C A G T C A T G C A C G T C G A T A T C G A C G T
C T G A C G A T C G T A G C A T C T G A G A C T C T A G C G T A A G C T G T C A A G T C G T A C A G T C A G C T G C T A C G A T G A C T

Spz1/MA0111.1/Jaspar

Match Rank:5
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-ATGDCACCCTTGT
GCTGTTACCCT---
 A C G T C T G A A C G T A C T G C T G A A T G C C G T A A T G C A G T C A T G C A C G T C G A T A T C G A C G T
A C T G T G A C A G C T A T C G G C A T C G A T G C T A G T A C A G T C T A G C A G C T A C G T A C G T A C G T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:6
Score:0.61
Offset:6
Orientation:forward strand
Alignment:ATGDCACCCTTGT-
------CCWTTGTY
 C T G A A C G T A C T G C T G A A T G C C G T A A T G C A G T C A T G C A C G T C G A T A T C G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A T C C G A T A C G T A C G T A C T G C A G T A G C T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:7
Score:0.61
Offset:6
Orientation:forward strand
Alignment:ATGDCACCCTTGT---
------CCWTTGTYYB
 C T G A A C G T A C T G C T G A A T G C C G T A A T G C A G T C A T G C A C G T C G A T A T C G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G

PH0161.1_Six1/Jaspar

Match Rank:8
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----ATGDCACCCTTGT
ANNNATGATACCCCATC
 A C G T A C G T A C G T A C G T C T G A A C G T A C T G C T G A A T G C C G T A A T G C A G T C A T G C A C G T C G A T A T C G A C G T
G T C A T G C A C G T A G T C A C T G A G A C T C A T G C G T A A G C T G T C A A G T C A T G C A G T C A G T C G C T A C G A T G A T C

PB0200.1_Zfp187_2/Jaspar

Match Rank:9
Score:0.60
Offset:3
Orientation:forward strand
Alignment:ATGDCACCCTTGT------
---GAGCCCTTGTCCCTAA
 C T G A A C G T A C T G C T G A A T G C C G T A A T G C A G T C A T G C A C G T C G A T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C T G C T G A C T A G G T A C A G T C A G T C G A C T A G C T T C A G G A C T G A T C A G T C G T A C G A C T G C A T T C A G

PB0029.1_Hic1_1/Jaspar

Match Rank:10
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---ATGDCACCCTTGT
ACTATGCCAACCTACC
 A C G T A C G T A C G T C T G A A C G T A C T G C T G A A T G C C G T A A T G C A G T C A T G C A C G T C G A T A T C G A C G T
C G T A A G T C A C G T C T G A A C G T C T A G A T G C A G T C G T C A T G C A A G T C A G T C G C A T C T G A G A T C G A T C