Information for 3-TGACCTTTGCTCT (Motif 4)

C G A T C T A G T G C A A T G C A G T C A G C T A G C T C A G T T A C G A G T C A G C T A T G C G A C T
Reverse Opposite:
C T G A T A C G T C G A T A C G A T G C G T C A T C G A T C G A T C A G T A C G A C G T G A T C G C T A
p-value:1e-15
log p-value:-3.582e+01
Information Content per bp:1.641
Number of Target Sequences with motif30.0
Percentage of Target Sequences with motif3.65%
Number of Background Sequences with motif244.7
Percentage of Background Sequences with motif0.52%
Average Position of motif in Targets54.6 +/- 26.8bp
Average Position of motif in Background49.6 +/- 27.0bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:1
Score:0.90
Offset:0
Orientation:reverse strand
Alignment:TGACCTTTGCTCT-
TGACCTTTGCCCTA
 C G A T C T A G T G C A A T G C A G T C A G C T A G C T C A G T T A C G A G T C A G C T A T G C G A C T A C G T
A G C T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G T G A C G A T C G A T C G A C T T C G A

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:2
Score:0.87
Offset:0
Orientation:reverse strand
Alignment:TGACCTTTGCTCT--
TGACCTTTGCCCTAN
 C G A T C T A G T G C A A T G C A G T C A G C T A G C T C A G T T A C G A G T C A G C T A T G C G A C T A C G T A C G T
C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G A T C G A C T T C G A T A G C

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:3
Score:0.86
Offset:0
Orientation:forward strand
Alignment:TGACCTTTGCTCT-
TGACCTTTGCCCCA
 C G A T C T A G T G C A A T G C A G T C A G C T A G C T C A G T T A C G A G T C A G C T A T G C G A C T A C G T
C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G T A C G A T C G T C A

HNF4G/MA0484.1/Jaspar

Match Rank:4
Score:0.85
Offset:0
Orientation:reverse strand
Alignment:TGACCTTTGCTCT--
TGGACTTTGNNCTCN
 C G A T C T A G T G C A A T G C A G T C A G C T A G C T C A G T T A C G A G T C A G C T A T G C G A C T A C G T A C G T
C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T T C A G T C A G G T C A G A T C G A C T A G T C G C A T

Nr2f6/MA0677.1/Jaspar

Match Rank:5
Score:0.82
Offset:0
Orientation:reverse strand
Alignment:TGACCTTTGCTCT-
TGACCTTTGACCTN
 C G A T C T A G T G C A A T G C A G T C A G C T A G C T C A G T T A C G A G T C A G C T A T G C G A C T A C G T
A G C T T C A G T G C A G T A C G T A C A G C T G A C T G A C T T C A G T G C A G T A C G T A C A G C T A G T C

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:6
Score:0.82
Offset:0
Orientation:reverse strand
Alignment:TGACCTTTGCTCT---
TGGACTTTGNNCTNTG
 C G A T C T A G T G C A A T G C A G T C A G C T A G C T C A G T T A C G A G T C A G C T A T G C G A C T A C G T A C G T A C G T
C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T C T A G T C G A G T A C G A T C G A C T A G T C C G A T C A T G

TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer

Match Rank:7
Score:0.81
Offset:0
Orientation:reverse strand
Alignment:TGACCTTTGCTCT-
TGACCTTTGACCTC
 C G A T C T A G T G C A A T G C A G T C A G C T A G C T C A G T T A C G A G T C A G C T A T G C G A C T A C G T
G A C T T A C G T G C A G T A C G A T C A G C T G A C T G A C T T A C G T G C A G T A C G A T C G A C T A G T C

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.80
Offset:-1
Orientation:reverse strand
Alignment:-TGACCTTTGCTCT
CTGACCTTTG----
 A C G T C G A T C T A G T G C A A T G C A G T C A G C T A G C T C A G T T A C G A G T C A G C T A T G C G A C T
A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G A C G T A C G T A C G T A C G T

Rxra/MA0512.2/Jaspar

Match Rank:9
Score:0.80
Offset:0
Orientation:reverse strand
Alignment:TGACCTTTGCTCT-
TGACCTTTGACCCC
 C G A T C T A G T G C A A T G C A G T C A G C T A G C T C A G T T A C G A G T C A G C T A T G C G A C T A C G T
A G C T T C A G T G C A T G A C T A G C A G C T G A C T A G C T T C A G T G C A G T A C G T A C A G T C A G T C

RXRG/MA0856.1/Jaspar

Match Rank:10
Score:0.80
Offset:0
Orientation:reverse strand
Alignment:TGACCTTTGCTCT-
TGACCTTTGACCCC
 C G A T C T A G T G C A A T G C A G T C A G C T A G C T C A G T T A C G A G T C A G C T A T G C G A C T A C G T
A G C T T C A G T G C A G T A C G T A C G A C T G A C T G A C T T C A G T G C A G T A C G T A C A G T C A G T C