Information for 8-CWKGCMTCTCAMT (Motif 8)

A G T C C G T A A C T G A T C G A G T C G T A C A C G T A G T C A C G T A G T C C G T A G T C A A C G T
Reverse Opposite:
T C G A A C G T A C G T A C T G C G T A A C T G C G T A A C T G A C T G A T G C G T A C C G A T A C T G
p-value:1e-10
log p-value:-2.417e+01
Information Content per bp:1.870
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.70%
Number of Background Sequences with motif3.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets40.7 +/- 23.6bp
Average Position of motif in Background57.0 +/- 31.9bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:1
Score:0.61
Offset:3
Orientation:forward strand
Alignment:CWKGCMTCTCAMT--
---GSCTGTCACTCA
 A G T C C G T A A C T G A T C G A G T C G T A C A C G T A G T C A C G T A G T C C G T A G T C A A C G T A C G T A C G T
A C G T A C G T A C G T C T A G A T G C A T G C C G A T A C T G G A C T A T G C G C T A T G A C A G C T T A G C G C T A

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:2
Score:0.59
Offset:2
Orientation:forward strand
Alignment:CWKGCMTCTCAMT
--AGCCACTCAAG
 A G T C C G T A A C T G A T C G A G T C G T A C A C G T A G T C A C G T A G T C C G T A G T C A A C G T
A C G T A C G T C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G

PH0141.1_Pknox2/Jaspar

Match Rank:3
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CWKGCMTCTCAMT--
AAGCACCTGTCAATAT
 A C G T A G T C C G T A A C T G A T C G A G T C G T A C A C G T A G T C A C G T A G T C C G T A G T C A A C G T A C G T A C G T
G C T A C T G A T C A G A T G C T C G A T A G C G T A C A G C T A C T G G A C T A G T C C T G A G T C A G C A T G C T A A G C T

MEIS3/MA0775.1/Jaspar

Match Rank:4
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:CWKGCMTCTCAMT
----CCTGTCAA-
 A G T C C G T A A C T G A T C G A G T C G T A C A C G T A G T C A C G T A G T C C G T A G T C A A C G T
A C G T A C G T A C G T A C G T T A G C T G A C G A C T C T A G G A C T A T G C C G T A G C T A A C G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:5
Score:0.56
Offset:2
Orientation:forward strand
Alignment:CWKGCMTCTCAMT
--AASCACTCAA-
 A G T C C G T A A C T G A T C G A G T C G T A C A C G T A G T C A C G T A G T C C G T A G T C A A C G T
A C G T A C G T C T G A C T G A T A G C G A T C G C T A G T A C A C G T G A T C T G C A C G T A A C G T

MEIS2/MA0774.1/Jaspar

Match Rank:6
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:CWKGCMTCTCAMT
----GCTGTCAA-
 A G T C C G T A A C T G A T C G A G T C G T A C A C G T A G T C A C G T A G T C C G T A G T C A A C G T
A C G T A C G T A C G T A C G T A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A A C G T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.55
Offset:4
Orientation:forward strand
Alignment:CWKGCMTCTCAMT---
----NCTGTCAATCAN
 A G T C C G T A A C T G A T C G A G T C G T A C A C G T A G T C A C G T A G T C C G T A G T C A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T A G C T A G C G A C T C T A G A G C T A G T C G T C A T G C A A C G T A T G C G C T A T G C A

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:8
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---CWKGCMTCTCAMT
NNACTTGCCTT-----
 A C G T A C G T A C G T A G T C C G T A A C T G A T C G A G T C G T A C A C G T A G T C A C G T A G T C C G T A G T C A A C G T
T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T A C G T A C G T A C G T A C G T A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-CWKGCMTCTCAMT
CNAGGCCT------
 A C G T A G T C C G T A A C T G A T C G A G T C G T A C A C G T A G T C A C G T A G T C C G T A G T C A A C G T
A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.52
Offset:1
Orientation:forward strand
Alignment:CWKGCMTCTCAMT
-RGGGCACTAACY
 A G T C C G T A A C T G A T C G A G T C G T A C A C G T A G T C A C G T A G T C C G T A G T C A A C G T
A C G T T C G A C A T G C A T G T A C G G T A C T C G A A G T C C A G T C T G A C G T A A G T C G A C T