Information for 12-AAAGAAADGTTTC (Motif 6)

C G T A C G T A C G T A C A T G C G T A C G T A C G T A C A G T C T A G A C G T A C G T C G A T A G T C
Reverse Opposite:
A C T G C G T A C G T A C G T A A G T C G C T A C G A T A C G T A C G T G T A C A C G T A C G T A C G T
p-value:1e-9
log p-value:-2.169e+01
Information Content per bp:1.849
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.61%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets61.2 +/- 34.8bp
Average Position of motif in Background52.4 +/- 15.9bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Foxd3/MA0041.1/Jaspar

Match Rank:1
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:AAAGAAADGTTTC
AAACAAACATTC-
 C G T A C G T A C G T A C A T G C G T A C G T A C G T A C A G T C T A G A C G T A C G T C G A T A G T C
C T G A T G C A C T G A G A T C G T C A C G T A C G T A G A T C C T G A C G A T C G A T G A T C A C G T

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:2
Score:0.61
Offset:-6
Orientation:forward strand
Alignment:------AAAGAAADGTTTC
TACTGGAAAAAAAA-----
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A C A T G C G T A C G T A C G T A C A G T C T A G A C G T A C G T C G A T A G T C
G C A T C T G A T G A C C A G T A C G T T C A G C G T A C G T A T C G A T C G A G C T A G T C A C G T A C T G A A C G T A C G T A C G T A C G T A C G T

PB0182.1_Srf_2/Jaspar

Match Rank:3
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----AAAGAAADGTTTC
GTTAAAAAAAAAAATTA-
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A C A T G C G T A C G T A C G T A C A G T C T A G A C G T A C G T C G A T A G T C
T A C G A C G T C G A T C G T A C T G A C T G A T G C A T G C A G T C A G C T A G T C A G T C A G T C A T G C A A C G T G C A T G C A T A C G T

PB0175.1_Sox4_2/Jaspar

Match Rank:4
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-AAAGAAADGTTTC---
GGAAAAATTGTTAGGAA
 A C G T C G T A C G T A C G T A C A T G C G T A C G T A C G T A C A G T C T A G A C G T A C G T C G A T A G T C A C G T A C G T A C G T
T A C G T C A G G C T A C G T A C T G A C T G A C T G A A G C T C G A T T C A G C G A T G A C T C T G A T A C G C T A G C T G A C T G A

Sox3/MA0514.1/Jaspar

Match Rank:5
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-AAAGAAADGTTTC
AAAACAAAGG----
 A C G T C G T A C G T A C G T A C A T G C G T A C G T A C G T A C A G T C T A G A C G T A C G T C G A T A G T C
T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:6
Score:0.57
Offset:0
Orientation:forward strand
Alignment:AAAGAAADGTTTC
RAACAATGGN---
 C G T A C G T A C G T A C A T G C G T A C G T A C G T A C A G T C T A G A C G T A C G T C G A T A G T C
C T G A T C G A C G T A A T G C C G T A C G T A C G A T C T A G T C A G G A T C A C G T A C G T A C G T

PB0116.1_Elf3_2/Jaspar

Match Rank:7
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----AAAGAAADGTTTC
GTTCAAAAAAAAAATTC-
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A C A T G C G T A C G T A C G T A C A G T C T A G A C G T A C G T C G A T A G T C
C A T G A G C T A C G T G T A C G T C A C G T A G C T A G C T A G C T A G C T A G C T A G C T A G C T A G T C A G A C T C G A T G A T C A C G T

PB0016.1_Foxj1_1/Jaspar

Match Rank:8
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----AAAGAAADGTTTC
AAAGTAAACAAAAATT--
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A C A T G C G T A C G T A C G T A C A G T C T A G A C G T A C G T C G A T A G T C
G C T A C G A T G C T A C T A G G A C T G T C A G C T A C G T A G A T C C G T A G T C A C G T A G T C A C G T A C A G T C A G T A C G T A C G T

PB0019.1_Foxl1_1/Jaspar

Match Rank:9
Score:0.56
Offset:-7
Orientation:forward strand
Alignment:-------AAAGAAADGTTTC
TAAATGTAAACAAAGGT---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A C A T G C G T A C G T A C G T A C A G T C T A G A C G T A C G T C G A T A G T C
C G A T C G T A C G T A C G T A G C A T C T A G C G A T G T C A C G T A C T G A A G T C C G T A G C T A C G T A T A C G T C A G A C G T A C G T A C G T A C G T

FOXP1/MA0481.1/Jaspar

Match Rank:10
Score:0.55
Offset:-7
Orientation:forward strand
Alignment:-------AAAGAAADGTTTC
CAAAAGTAAACAAAG-----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A C A T G C G T A C G T A C G T A C A G T C T A G A C G T A C G T C G A T A G T C
G T A C G C T A C G T A T C G A C T G A T C A G G C A T C G T A C G T A C G T A T G A C C G T A T G C A C G T A T C A G A C G T A C G T A C G T A C G T A C G T