Information for 3-ATGGCACCACCTGTTG (Motif 3)

G T C A A C G T A C T G A T C G G T A C C G T A T G A C A G T C G T C A A T G C A G T C A C G T A T C G A C G T C A G T A T C G
Reverse Opposite:
T A G C G T C A T G C A T A G C C G T A A C T G A T C G C A G T C T A G A C T G C G A T A C T G A T G C A G T C G T C A A C G T
p-value:1e-16
log p-value:-3.777e+01
Information Content per bp:1.688
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.20%
Number of Background Sequences with motif6.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets46.3 +/- 10.0bp
Average Position of motif in Background67.7 +/- 21.0bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SCRT1/MA0743.1/Jaspar

Match Rank:1
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:ATGGCACCACCTGTTG---
----ANCCACCTGTTGCNC
 G T C A A C G T A C T G A T C G G T A C C G T A T G A C A G T C G T C A A T G C A G T C A C G T A T C G A C G T C A G T A T C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T G A T C G A T G A C G T A C T C G A G T A C G A T C A C G T A C T G A C G T C A G T C T A G T G A C C G A T A G T C

FIGLA/MA0820.1/Jaspar

Match Rank:2
Score:0.61
Offset:5
Orientation:forward strand
Alignment:ATGGCACCACCTGTTG
-----ACCACCTGTT-
 G T C A A C G T A C T G A T C G G T A C C G T A T G A C A G T C G T C A A T G C A G T C A C G T A T C G A C G T C A G T A T C G
A C G T A C G T A C G T A C G T A C G T G C T A G T A C A G T C G T C A A T G C T A G C C G A T C A T G A C G T C G A T A C G T

SCRT2/MA0744.1/Jaspar

Match Rank:3
Score:0.60
Offset:6
Orientation:reverse strand
Alignment:ATGGCACCACCTGTTG---
------CCACCTGTTGCAT
 G T C A A C G T A C T G A T C G G T A C C G T A T G A C A G T C G T C A A T G C A G T C A C G T A T C G A C G T C A G T A T C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A G C G T A C C G T A A T G C A G T C A C G T C A T G A C G T A C G T A C T G T G A C C G T A A G C T

NFIX/MA0671.1/Jaspar

Match Rank:4
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-ATGGCACCACCTGTTG
NTTGGCANN--------
 A C G T G T C A A C G T A C T G A T C G G T A C C G T A T G A C A G T C G T C A A T G C A G T C A C G T A T C G A C G T C A G T A T C G
A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0117.1_Eomes_2/Jaspar

Match Rank:5
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:ATGGCACCACCTGTTG
NNGGCGACACCTCNNN
 G T C A A C G T A C T G A T C G G T A C C G T A T G A C A G T C G T C A A T G C A G T C A C G T A T C G A C G T C A G T A T C G
A T C G T C G A T C A G A T C G T G A C C T A G G C T A A G T C C T G A A T G C A G T C G A C T G A T C A G T C T A C G A G T C

NFIC/MA0161.1/Jaspar

Match Rank:6
Score:0.57
Offset:0
Orientation:forward strand
Alignment:ATGGCACCACCTGTTG
TTGGCA----------
 G T C A A C G T A C T G A T C G G T A C C G T A T G A C A G T C G T C A A T G C A G T C A C G T A T C G A C G T C A G T A T C G
G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Hic1/MA0739.1/Jaspar

Match Rank:7
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--ATGGCACCACCTGTTG
GGTTGGCAT---------
 A C G T A C G T G T C A A C G T A C T G A T C G G T A C C G T A T G A C A G T C G T C A A T G C A G T C A C G T A T C G A C G T C A G T A T C G
T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--ATGGCACCACCTGTTG--
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T G T C A A C G T A C T G A T C G G T A C C G T A T G A C A G T C G T C A A T G C A G T C A C G T A T C G A C G T C A G T A T C G A C G T A C G T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:9
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-ATGGCACCACCTGTTG
CTTGGCAA---------
 A C G T G T C A A C G T A C T G A T C G G T A C C G T A T G A C A G T C G T C A A T G C A G T C A C G T A T C G A C G T C A G T A T C G
A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFIA/MA0670.1/Jaspar

Match Rank:10
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--ATGGCACCACCTGTTG
NNTTGGCANN--------
 A C G T A C G T G T C A A C G T A C T G A T C G G T A C C G T A T G A C A G T C G T C A A T G C A G T C A C G T A T C G A C G T C A G T A T C G
G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T