Information for 6-SYCYGSCRGCCWGWAS (Motif 8)

A T G C A G T C A G T C A G C T A C T G A T C G G T A C C T A G C T A G A G T C A G T C C G A T A C T G G C T A C G T A A T C G
Reverse Opposite:
A T G C A C G T C G A T A G T C C G T A A C T G A C T G A G T C A G T C A C T G A T G C A G T C C T G A A C T G C T A G A T C G
p-value:1e-10
log p-value:-2.411e+01
Information Content per bp:1.800
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.69%
Number of Background Sequences with motif3.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets41.7 +/- 27.6bp
Average Position of motif in Background58.8 +/- 2.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:1
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-SYCYGSCRGCCWGWAS
TGGCAGNCTGCCAG---
 A C G T A T G C A G T C A G T C A G C T A C T G A T C G G T A C C T A G C T A G A G T C A G T C C G A T A C T G G C T A C G T A A T C G
C A G T A C T G A T C G T G A C G C T A A C T G T A G C G T A C C G A T A C T G T A G C G T A C G C T A T C A G A C G T A C G T A C G T

PB0164.1_Smad3_2/Jaspar

Match Rank:2
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----SYCYGSCRGCCWGWAS
TACGCCCCGCCACTCTG---
 A C G T A C G T A C G T A C G T A T G C A G T C A G T C A G C T A C T G A T C G G T A C C T A G C T A G A G T C A G T C C G A T A C T G G C T A C G T A A T C G
C A G T G T C A G T A C A C T G G A T C A G T C T A G C A T G C T A C G A G T C G T A C G T C A G T A C G A C T A G T C G A C T A C T G A C G T A C G T A C G T

THAP1/MA0597.1/Jaspar

Match Rank:3
Score:0.50
Offset:6
Orientation:forward strand
Alignment:SYCYGSCRGCCWGWAS
------CTGCCCGCA-
 A T G C A G T C A G T C A G C T A C T G A T C G G T A C C T A G C T A G A G T C A G T C C G A T A C T G G C T A C G T A A T C G
A C G T A C G T A C G T A C G T A C G T A C G T A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A A C G T

PB0029.1_Hic1_1/Jaspar

Match Rank:4
Score:0.49
Offset:-1
Orientation:forward strand
Alignment:-SYCYGSCRGCCWGWAS
ACTATGCCAACCTACC-
 A C G T A T G C A G T C A G T C A G C T A C T G A T C G G T A C C T A G C T A G A G T C A G T C C G A T A C T G G C T A C G T A A T C G
C G T A A G T C A C G T C T G A A C G T C T A G A T G C A G T C G T C A T G C A A G T C A G T C G C A T C T G A G A T C G A T C A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:5
Score:0.49
Offset:5
Orientation:reverse strand
Alignment:SYCYGSCRGCCWGWAS
-----BCAGACWA---
 A T G C A G T C A G T C A G C T A C T G A T C G G T A C C T A G C T A G A G T C A G T C C G A T A C T G G C T A C G T A A T C G
A C G T A C G T A C G T A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T A C G T

ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer

Match Rank:6
Score:0.48
Offset:7
Orientation:forward strand
Alignment:SYCYGSCRGCCWGWAS-
-------ANCCGGAAGT
 A T G C A G T C A G T C A G C T A C T G A T C G G T A C C T A G C T A G A G T C A G T C C G A T A C T G G C T A C G T A A T C G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A T G C A T A G C T G A C T A C G T C A G C T G A G C T A T C A G G A C T

ELK4/MA0076.2/Jaspar

Match Rank:7
Score:0.48
Offset:8
Orientation:reverse strand
Alignment:SYCYGSCRGCCWGWAS---
--------NCCGGAAGTGG
 A T G C A G T C A G T C A G C T A C T G A T C G G T A C C T A G C T A G A G T C A G T C C G A T A C T G G C T A C G T A A T C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G T A G C G T A C A C T G A C T G C G T A C G T A T C A G G A C T T A C G T A C G

ETS(ETS)/Promoter/Homer

Match Rank:8
Score:0.47
Offset:7
Orientation:forward strand
Alignment:SYCYGSCRGCCWGWAS-
-------AACCGGAAGT
 A T G C A G T C A G T C A G C T A C T G A T C G G T A C C T A G C T A G A G T C A G T C C G A T A C T G G C T A C G T A A T C G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G C A T C G A T A G C G T A C T C A G C T A G G T C A G C T A T C A G G A C T

Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.47
Offset:8
Orientation:reverse strand
Alignment:SYCYGSCRGCCWGWAS--
--------RCCGGAAGTD
 A T G C A G T C A G T C A G C T A C T G A T C G G T A C C T A G C T A G A G T C A G T C C G A T A C T G G C T A C G T A A T C G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A T A G C T G A C T A C G T C A G G C T A G C T A T C A G A G C T C T A G

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.47
Offset:5
Orientation:reverse strand
Alignment:SYCYGSCRGCCWGWAS
-----CCAGACAG---
 A T G C A G T C A G T C A G C T A C T G A T C G G T A C C T A G C T A G A G T C A G T C C G A T A C T G G C T A C G T A A T C G
A C G T A C G T A C G T A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T A C G T