Information for 9-GACGMMAGAG (Motif 12)

A T C G C G T A G T A C T C A G G T C A T G A C G C T A A C T G C T G A C T A G
Reverse Opposite:
A G T C G A C T T G A C C G A T A C T G C A G T A G T C C A T G G C A T T A G C
p-value:1e-8
log p-value:-2.026e+01
Information Content per bp:1.553
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif1.97%
Number of Background Sequences with motif139.3
Percentage of Background Sequences with motif0.29%
Average Position of motif in Targets48.0 +/- 31.2bp
Average Position of motif in Background49.6 +/- 31.0bp
Strand Bias (log2 ratio + to - strand density)1.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZBTB33/MA0527.1/Jaspar

Match Rank:1
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----GACGMMAGAG
NAGNTCTCGCGAGAN
 A C G T A C G T A C G T A C G T A C G T A T C G C G T A G T A C T C A G G T C A T G A C G C T A A C T G C T G A C T A G
T A G C T C G A T C A G T C G A A G C T T G A C A G C T A G T C C T A G G A T C A C T G C T G A A C T G T C G A T C A G

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:2
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:GACGMMAGAG--
--CTYRAGTGSY
 A T C G C G T A G T A C T C A G G T C A T G A C G C T A A C T G C T G A C T A G A C G T A C G T
A C G T A C G T A T G C G C A T A G C T C T A G C G T A A C T G C G A T C T A G A T G C G A T C

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:3
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:GACGMMAGAG---
---TTGAGTGSTT
 A T C G C G T A G T A C T C A G G T C A T G A C G C T A A C T G C T G A C T A G A C G T A C G T A C G T
A C G T A C G T A C G T G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:4
Score:0.55
Offset:2
Orientation:forward strand
Alignment:GACGMMAGAG--
--BTBRAGTGSN
 A T C G C G T A G T A C T C A G G T C A T G A C G C T A A C T G C T G A C T A G A C G T A C G T
A C G T A C G T A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C

PB0140.1_Irf6_2/Jaspar

Match Rank:5
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:GACGMMAGAG------
-NNNACCGAGAGTNNN
 A T C G C G T A G T A C T C A G G T C A T G A C G C T A A C T G C T G A C T A G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A T C G G A C T C A T G G T C A A G T C G A T C C T A G T C G A T A C G G T C A C A T G C G A T T C A G T A C G A C G T

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.54
Offset:0
Orientation:forward strand
Alignment:GACGMMAGAG--
GRTGMTRGAGCC
 A T C G C G T A G T A C T C A G G T C A T G A C G C T A A C T G C T G A C T A G A C G T A C G T
A T C G T C G A G A C T A T C G T G A C A C G T C T A G A C T G C G T A A C T G A G T C G T A C

Gmeb1/MA0615.1/Jaspar

Match Rank:7
Score:0.53
Offset:-5
Orientation:forward strand
Alignment:-----GACGMMAGAG--
GAGTGTACGTAAGATGG
 A C G T A C G T A C G T A C G T A C G T A T C G C G T A G T A C T C A G G T C A T G A C G C T A A C T G C T G A C T A G A C G T A C G T
A T C G G T C A A C T G A C G T C A G T C A G T T C G A A G T C C T A G A G C T G T C A G T A C T A C G C G T A A G C T T C A G A T C G

PB0027.1_Gmeb1_1/Jaspar

Match Rank:8
Score:0.53
Offset:-5
Orientation:forward strand
Alignment:-----GACGMMAGAG--
GAGTGTACGTAAGATGG
 A C G T A C G T A C G T A C G T A C G T A T C G C G T A G T A C T C A G G T C A T G A C G C T A A C T G C T G A C T A G A C G T A C G T
A T C G G T C A A C T G A C G T C A G T C A G T T C G A A G T C C T A G A G C T G T C A G T A C T A C G C G T A A G C T T C A G A T C G

GFX(?)/Promoter/Homer

Match Rank:9
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---GACGMMAGAG
ATTCTCGCGAGA-
 A C G T A C G T A C G T A T C G C G T A G T A C T C A G G T C A T G A C G C T A A C T G C T G A C T A G
T C G A G A C T A G C T T G A C A G C T G T A C T C A G G A T C A T C G T G C A A C T G C T G A A C G T

EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer

Match Rank:10
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-GACGMMAGAG-
NGTCCCNNGGGA
 A C G T A T C G C G T A G T A C T C A G G T C A T G A C G C T A A C T G C T G A C T A G A C G T
C T A G A T C G G A C T A G T C A G T C A G T C G A C T C T G A A C T G C T A G A C T G C T G A