Information for 5-TTGGTTATTT (Motif 6)

A C G T G A C T C A T G A C T G A C G T A C G T C G T A C G A T A C G T C G A T
Reverse Opposite:
C G T A C G T A C G T A A C G T G T C A G T C A G T A C G A T C C T G A T G C A
p-value:1e-9
log p-value:-2.108e+01
Information Content per bp:1.842
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.68%
Number of Background Sequences with motif85.5
Percentage of Background Sequences with motif0.18%
Average Position of motif in Targets48.6 +/- 30.7bp
Average Position of motif in Background50.9 +/- 28.6bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0119.1_Foxa2_2/Jaspar

Match Rank:1
Score:0.78
Offset:-3
Orientation:reverse strand
Alignment:---TTGGTTATTT--
NCNTTTGTTATTTNN
 A C G T A C G T A C G T A C G T G A C T C A T G A C T G A C G T A C G T C G T A C G A T A C G T C G A T A C G T A C G T
A T G C A T G C A T C G A G C T C A G T C A G T C T A G G C A T G A C T T C G A C A G T G A C T G C A T A G C T A G C T

Foxq1/MA0040.1/Jaspar

Match Rank:2
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--TTGGTTATTT
TATTGTTTATT-
 A C G T A C G T A C G T G A C T C A T G A C T G A C G T A C G T C G T A C G A T A C G T C G A T
G A C T C T G A G C A T C G A T A C T G A C G T A C G T A C G T C T G A A C G T C G A T A C G T

MF0005.1_Forkhead_class/Jaspar

Match Rank:3
Score:0.68
Offset:1
Orientation:forward strand
Alignment:TTGGTTATTT
-TGTTTATTT
 A C G T G A C T C A T G A C T G A C G T A C G T C G T A C G A T A C G T C G A T
A C G T G C A T C T A G A G C T G A C T C A G T C T G A A G C T C A G T A G C T

PB0093.1_Zfp105_1/Jaspar

Match Rank:4
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--TTGGTTATTT---
NTNTTGTTGTTTGTN
 A C G T A C G T A C G T G A C T C A T G A C T G A C G T A C G T C G T A C G A T A C G T C G A T A C G T A C G T A C G T
G A T C C G A T G T A C C G A T G A C T C A T G G C A T A G C T C T A G C G A T C G A T C A G T C T A G G A C T C G A T

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:TTGGTTATTT-----
---KCTATTTTTRGH
 A C G T G A C T C A T G A C T G A C G T A C G T C G T A C G A T A C G T C G A T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A T G A G T C G A C T C G T A C G A T G C A T G C A T G C A T C G A T C T G A C A T G G T A C

Foxj3/MA0851.1/Jaspar

Match Rank:6
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----TTGGTTATTT---
NNNTTTGTTTACNTTNN
 A C G T A C G T A C G T A C G T A C G T G A C T C A T G A C T G A C G T A C G T C G T A C G A T A C G T C G A T A C G T A C G T A C G T
C A T G A C G T A T C G C G A T C G A T C G A T C T A G C G A T C G A T A C G T C T G A A G T C G A C T G C A T C A G T G A C T C A G T

PB0017.1_Foxj3_1/Jaspar

Match Rank:7
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----TTGGTTATTT---
NNNTTTGTTTACNTTNN
 A C G T A C G T A C G T A C G T A C G T G A C T C A T G A C T G A C G T A C G T C G T A C G A T A C G T C G A T A C G T A C G T A C G T
C A T G A C G T A T C G C G A T C G A T C G A T C T A G C G A T C G A T A C G T C T G A A G T C G A C T G C A T C A G T G A C T C A G T

Foxd3/MA0041.1/Jaspar

Match Rank:8
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--TTGGTTATTT
GAATGTTTGTTT
 A C G T A C G T A C G T G A C T C A T G A C T G A C G T A C G T C G T A C G A T A C G T C G A T
C T A G G C T A G C T A G A C T C T A G A C G T C G A T C A G T C T A G G A C T A C G T A G C T

PB0081.1_Tcf1_1/Jaspar

Match Rank:9
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---TTGGTTATTT----
NNNTTAGTTAACTNANN
 A C G T A C G T A C G T A C G T G A C T C A T G A C T G A C G T A C G T C G T A C G A T A C G T C G A T A C G T A C G T A C G T A C G T
G A C T C A G T G A C T A G C T G A C T C T G A T A C G G A C T C G A T C G T A C G T A A G T C A G C T C T G A T C G A C T A G A C G T

Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer

Match Rank:10
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TTGGTTATTT--
NTGTTTAYATWW
 A C G T G A C T C A T G A C T G A C G T A C G T C G T A C G A T A C G T C G A T A C G T A C G T
C A G T A C G T C T A G A C G T A C G T A C G T C G T A A G C T T G C A G A C T C G T A C G T A