Information for 4-GCCACTGTCTCAGAGC (Motif 4)

A C T G A T G C A G T C C T G A A G T C A C G T A C T G C G A T T A G C A C G T A G T C C G T A A C T G C T G A A C T G A T G C
Reverse Opposite:
A T C G A G T C A G C T A G T C C G A T A C T G C G T A A C T G C G T A A G T C C G T A A C T G A G C T A C T G A T C G A G T C
p-value:1e-10
log p-value:-2.503e+01
Information Content per bp:1.915
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.60%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets64.0 +/- 23.0bp
Average Position of motif in Background32.4 +/- 3.2bp
Strand Bias (log2 ratio + to - strand density)-2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0168.1_Sox14_2/Jaspar

Match Rank:1
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--GCCACTGTCTCAGAGC
NNNCCATTGTGTNAN---
 A C G T A C G T A C T G A T G C A G T C C T G A A G T C A C G T A C T G C G A T T A G C A C G T A G T C C G T A A C T G C T G A A C T G A T G C
A T C G T G A C A C T G A G T C G A T C C G T A A C G T A C G T T A C G G C A T A T C G A G C T T C A G T G C A T C A G A C G T A C G T A C G T

PB0051.1_Osr2_1/Jaspar

Match Rank:2
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----GCCACTGTCTCAGAGC
CNNNGCTACTGTANNN----
 A C G T A C G T A C G T A C G T A C T G A T G C A G T C C T G A A G T C A C G T A C T G C G A T T A G C A C G T A G T C C G T A A C T G C T G A A C T G A T G C
G A T C C G A T A C G T C G A T T C A G A G T C A G C T G C T A A G T C A G C T C A T G A C G T C G T A A G T C C G T A C G A T A C G T A C G T A C G T A C G T

PB0050.1_Osr1_1/Jaspar

Match Rank:3
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----GCCACTGTCTCAGAGC
TNNTGCTACTGTNNNN----
 A C G T A C G T A C G T A C G T A C T G A T G C A G T C C T G A A G T C A C G T A C T G C G A T T A G C A C G T A G T C C G T A A C T G C T G A A C T G A T G C
G A C T C G A T A C G T C G A T T C A G A G T C A G C T G C T A A G T C A G C T C T A G A C G T C G T A G C T A C G T A C G A T A C G T A C G T A C G T A C G T

Sox6/MA0515.1/Jaspar

Match Rank:4
Score:0.53
Offset:1
Orientation:forward strand
Alignment:GCCACTGTCTCAGAGC
-CCATTGTTTT-----
 A C T G A T G C A G T C C T G A A G T C A C G T A C T G C G A T T A G C A C G T A G T C C G T A A C T G C T G A A C T G A T G C
A C G T A G T C A G T C C G T A A C G T A C G T A C T G A C G T A G C T G A C T A G C T A C G T A C G T A C G T A C G T A C G T

Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer

Match Rank:5
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----GCCACTGTCTCAGAGC
GTAGGTCACTGGGTCA----
 A C G T A C G T A C G T A C G T A C T G A T G C A G T C C T G A A G T C A C G T A C T G C G A T T A G C A C G T A G T C C G T A A C T G C T G A A C T G A T G C
A T C G A G C T C T G A C T A G A C T G A C G T G T A C G C T A A T G C A C G T C T A G C A T G T A C G C G A T A T G C C G T A A C G T A C G T A C G T A C G T

FOS::JUN/MA0099.2/Jaspar

Match Rank:6
Score:0.51
Offset:5
Orientation:forward strand
Alignment:GCCACTGTCTCAGAGC
-----TGACTCA----
 A C T G A T G C A G T C C T G A A G T C A C G T A C T G C G A T T A G C A C G T A G T C C G T A A C T G C T G A A C T G A T G C
A C G T A C G T A C G T A C G T A C G T A G C T A C T G G T C A T G A C C G A T A T G C C G T A A C G T A C G T A C G T A C G T

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:7
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:GCCACTGTCTCAGAGC
NCCATTGTTY------
 A C T G A T G C A G T C C T G A A G T C A C G T A C T G C G A T T A G C A C G T A G T C C G T A A C T G C T G A A C T G A T G C
C T A G A G T C G A T C G C T A C G A T A C G T A T C G A C G T A G C T G A C T A C G T A C G T A C G T A C G T A C G T A C G T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:8
Score:0.51
Offset:4
Orientation:forward strand
Alignment:GCCACTGTCTCAGAGC-
----CTGTCTGTCACCT
 A C T G A T G C A G T C C T G A A G T C A C G T A C T G C G A T T A G C A C G T A G T C C G T A A C T G C T G A A C T G A T G C A C G T
A C G T A C G T A C G T A C G T T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T

AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.51
Offset:4
Orientation:forward strand
Alignment:GCCACTGTCTCAGAGC
----ATGACTCATC--
 A C T G A T G C A G T C C T G A A G T C A C G T A C T G C G A T T A G C A C G T A G T C C G T A A C T G C T G A A C T G A T G C
A C G T A C G T A C G T A C G T T C G A A C G T C A T G G C T A T A G C C G A T G T A C G C T A A C G T A T G C A C G T A C G T

PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.51
Offset:0
Orientation:forward strand
Alignment:GCCACTGTCTCAGAGC
GTCACGCTCNCTGA--
 A C T G A T G C A G T C C T G A A G T C A C G T A C T G C G A T T A G C A C G T A G T C C G T A A C T G C T G A A C T G A T G C
A C T G G A C T A G T C C T G A G A T C T C A G A T G C G A C T A G T C A T G C T A G C A G C T A T C G T G C A A C G T A C G T