Information for 2-TAGDGGGCGVTGTCTG (Motif 5)

A G C T C T G A A C T G C G T A C T A G A C T G A C T G A T G C A C T G T A G C A C G T A T C G A C G T A T G C A C G T A T C G
Reverse Opposite:
A T G C G T C A A T C G C G T A A T G C C G T A A C T G A G T C A T C G A G T C A G T C A G T C G A C T A G T C A G C T C T G A
p-value:1e-15
log p-value:-3.650e+01
Information Content per bp:1.817
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.82%
Number of Background Sequences with motif0.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets45.0 +/- 12.7bp
Average Position of motif in Background52.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0076.1_Sp4_1/Jaspar

Match Rank:1
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---TAGDGGGCGVTGTCTG
NNNAAGGGGGCGGGNNN--
 A C G T A C G T A C G T A G C T C T G A A C T G C G T A C T A G A C T G A C T G A T G C A C T G T A G C A C G T A T C G A C G T A T G C A C G T A T C G
T A C G T C G A A T C G C T G A C T G A C T A G C A T G C T A G A T C G A C T G G A T C A C T G A C T G C A T G C T G A G A T C T G A C A C G T A C G T

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:2
Score:0.62
Offset:1
Orientation:forward strand
Alignment:TAGDGGGCGVTGTCTG
-RGKGGGCGGAGC---
 A G C T C T G A A C T G C G T A C T A G A C T G A C T G A T G C A C T G T A G C A C G T A T C G A C G T A T G C A C G T A T C G
A C G T C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C A C G T A C G T A C G T

POL003.1_GC-box/Jaspar

Match Rank:3
Score:0.60
Offset:1
Orientation:forward strand
Alignment:TAGDGGGCGVTGTCTG
-AGGGGGCGGGGCTG-
 A G C T C T G A A C T G C G T A C T A G A C T G A C T G A T G C A C T G T A G C A C G T A T C G A C G T A T G C A C G T A T C G
A C G T C G T A C T A G C A T G T C A G A C T G C T A G G T A C C T A G A C T G C T A G C A T G A G T C A G C T C A T G A C G T

SP8/MA0747.1/Jaspar

Match Rank:4
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:TAGDGGGCGVTGTCTG
-AGTGGGCGTGGC---
 A G C T C T G A A C T G C G T A C T A G A C T G A C T G A T G C A C T G T A G C A C G T A T C G A C G T A T G C A C G T A T C G
A C G T C T G A T C A G A C G T T C A G A T C G A T C G T G A C C A T G C A G T C A T G C A T G A G T C A C G T A C G T A C G T

KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.59
Offset:1
Orientation:forward strand
Alignment:TAGDGGGCGVTGTCTG
-RGKGGGCGKGGC---
 A G C T C T G A A C T G C G T A C T A G A C T G A C T G A T G C A C T G T A G C A C G T A T C G A C G T A T G C A C G T A T C G
A C G T C T A G T C A G C A G T T C A G A C T G A C T G G A T C C T A G A C T G C T A G T C A G A T G C A C G T A C G T A C G T

PB0039.1_Klf7_1/Jaspar

Match Rank:6
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TAGDGGGCGVTGTCTG
NNAGGGGCGGGGTNNA
 A G C T C T G A A C T G C G T A C T A G A C T G A C T G A T G C A C T G T A G C A C G T A T C G A C G T A T G C A C G T A T C G
G C T A C G A T C T G A C T A G C T A G A C T G A C T G G A T C C A T G A C T G C A T G C A T G A G C T G A T C T C A G C G T A

SP4/MA0685.1/Jaspar

Match Rank:7
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-TAGDGGGCGVTGTCTG
NAAGGGGGCGTGGCTTN
 A C G T A G C T C T G A A C T G C G T A C T A G A C T G A C T G A T G C A C T G T A G C A C G T A T C G A C G T A T G C A C G T A T C G
C T G A C T G A C G T A C T A G C A T G T C A G A C T G A T C G T G A C A C T G A C G T T C A G C A T G G A T C G A C T C G A T T C G A

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.57
Offset:9
Orientation:forward strand
Alignment:TAGDGGGCGVTGTCTG-
---------CTGTCTGG
 A G C T C T G A A C T G C G T A C T A G A C T G A C T G A T G C A C T G T A G C A C G T A T C G A C G T A T G C A C G T A T C G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.57
Offset:7
Orientation:forward strand
Alignment:TAGDGGGCGVTGTCTG-
-------VBSYGTCTGG
 A G C T C T G A A C T G C G T A C T A G A C T G A C T G A T G C A C T G T A G C A C G T A T C G A C G T A T G C A C G T A T C G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G

PB0060.1_Smad3_1/Jaspar

Match Rank:10
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:TAGDGGGCGVTGTCTG------
-----NNTNNTGTCTGGNNTNG
 A G C T C T G A A C T G C G T A C T A G A C T G A C T G A T G C A C T G T A G C A C G T A T C G A C G T A T G C A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G