Information for 6-CGCTGATTGGCTG (Motif 8)

A G T C A C T G T A G C G A C T A T C G C G T A A C G T C G A T A C T G A C T G A G T C A G C T A T C G
Reverse Opposite:
T A G C T C G A A C T G A G T C A G T C C G T A T C G A A C G T T A G C C T G A A T C G T G A C T C A G
p-value:1e-16
log p-value:-3.880e+01
Information Content per bp:1.757
Number of Target Sequences with motif25.0
Percentage of Target Sequences with motif2.87%
Number of Background Sequences with motif123.1
Percentage of Background Sequences with motif0.27%
Average Position of motif in Targets50.8 +/- 27.5bp
Average Position of motif in Background45.9 +/- 35.1bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFY(CCAAT)/Promoter/Homer

Match Rank:1
Score:0.86
Offset:2
Orientation:reverse strand
Alignment:CGCTGATTGGCTG
--CCGATTGGCT-
 A G T C A C T G T A G C G A C T A T C G C G T A A C G T C G A T A C T G A C T G A G T C A G C T A T C G
A C G T A C G T A T G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T A C G T

NFYB/MA0502.1/Jaspar

Match Rank:2
Score:0.85
Offset:2
Orientation:reverse strand
Alignment:CGCTGATTGGCTG----
--CTGATTGGTCNATTT
 A G T C A C T G T A G C G A C T A T C G C G T A A C G T C G A T A C T G A C T G A G T C A G C T A T C G A C G T A C G T A C G T A C G T
A C G T A C G T A T G C A G C T A T C G C G T A A G C T A C G T A C T G A C T G G A C T A G T C T A G C T C G A C A G T C A G T A G C T

POL004.1_CCAAT-box/Jaspar

Match Rank:3
Score:0.82
Offset:3
Orientation:reverse strand
Alignment:CGCTGATTGGCTG--
---TGATTGGCTANN
 A G T C A C T G T A G C G A C T A T C G C G T A A C G T C G A T A C T G A C T G A G T C A G C T A T C G A C G T A C G T
A C G T A C G T A C G T A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T

NFYA/MA0060.2/Jaspar

Match Rank:4
Score:0.81
Offset:-4
Orientation:forward strand
Alignment:----CGCTGATTGGCTG-
AGAGTGCTGATTGGTCCA
 A C G T A C G T A C G T A C G T A G T C A C T G T A G C G A C T A T C G C G T A A C G T C G A T A C T G A C T G A G T C A G C T A T C G A C G T
G C T A C A T G T G C A T A C G G A C T A C T G A G T C A G C T A T C G C T G A A G C T C G A T T C A G T A C G G A C T A G T C T A G C T C G A

Dux/MA0611.1/Jaspar

Match Rank:5
Score:0.71
Offset:2
Orientation:reverse strand
Alignment:CGCTGATTGGCTG
--TTGATTGN---
 A G T C A C T G T A G C G A C T A T C G C G T A A C G T C G A T A C T G A C T G A G T C A G C T A T C G
A C G T A C G T G A C T A C G T A C T G C G T A A C G T A C G T C T A G A T C G A C G T A C G T A C G T

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:6
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:CGCTGATTGGCTG-
--BTGABTGACAGS
 A G T C A C T G T A G C G A C T A T C G C G T A A C G T C G A T A C T G A C T G A G T C A G C T A T C G A C G T
A C G T A C G T A C G T C G A T A C T G C G T A A C G T A C G T A C T G C T G A A G T C C T G A T A C G A T G C

PH0026.1_Duxbl/Jaspar

Match Rank:7
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---CGCTGATTGGCTG-
NNNNGTTGATTGGGTCG
 A C G T A C G T A C G T A G T C A C T G T A G C G A C T A T C G C G T A A C G T C G A T A C T G A C T G A G T C A G C T A T C G A C G T
A T G C C G T A A G T C A G T C T C A G G A C T C G A T C T A G C T G A A C G T A C G T C T A G T C A G T C A G G A C T G A T C T C A G

Gfi1/MA0038.1/Jaspar

Match Rank:8
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:CGCTGATTGGCTG
CNGTGATTTN---
 A G T C A C T G T A G C G A C T A T C G C G T A A C G T C G A T A C T G A C T G A G T C A G C T A T C G
A T G C C G T A A T C G C G A T A C T G G C T A A C G T A C G T A C G T C T A G A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:9
Score:0.65
Offset:6
Orientation:forward strand
Alignment:CGCTGATTGGCTG
------TTGGCA-
 A G T C A C T G T A G C G A C T A T C G C G T A A C G T C G A T A C T G A C T G A G T C A G C T A T C G
A C G T A C G T A C G T A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:CGCTGATTGGCTG-
--NTGATTGACAGN
 A G T C A C T G T A G C G A C T A T C G C G T A A C G T C G A T A C T G A C T G A G T C A G C T A T C G A C G T
A C G T A C G T A C G T C G A T A T C G C G T A A C G T C A G T A C T G C T G A A G T C C T G A A T C G A T C G