Information for 25-RGCAAMGAGGCTG (Motif 33)

C T G A A C T G A G T C T G C A C G T A G T A C C T A G G T C A C T A G A C T G A T G C C G A T A C T G
Reverse Opposite:
G T A C C G T A T A C G T G A C A G T C A C G T A G T C A C T G A C G T A C G T A C T G A G T C A G C T
p-value:1e-4
log p-value:-9.873e+00
Information Content per bp:1.690
Number of Target Sequences with motif37.0
Percentage of Target Sequences with motif4.24%
Number of Background Sequences with motif931.3
Percentage of Background Sequences with motif2.08%
Average Position of motif in Targets43.1 +/- 25.9bp
Average Position of motif in Background49.7 +/- 28.8bp
Strand Bias (log2 ratio + to - strand density)-0.9
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:1
Score:0.57
Offset:-6
Orientation:forward strand
Alignment:------RGCAAMGAGGCTG
CCGCATAGCAACGGA----
 A C G T A C G T A C G T A C G T A C G T A C G T C T G A A C T G A G T C T G C A C G T A G T A C C T A G G T C A C T A G A C T G A T G C C G A T A C T G
A G T C A G T C T A C G A T G C G C T A G A C T T C G A C T A G G A T C C T G A T C G A A G T C T A C G T C A G C T G A A C G T A C G T A C G T A C G T

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:2
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--RGCAAMGAGGCTG
WAAGTAAAYA-----
 A C G T A C G T C T G A A C T G A G T C T G C A C G T A G T A C C T A G G T C A C T A G A C T G A T G C C G A T A C T G
G C A T T C G A C T G A T C A G A G C T G T C A G T C A C T G A A G T C T G C A A C G T A C G T A C G T A C G T A C G T

T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer

Match Rank:3
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:RGCAAMGAGGCTG
AGAAACGAAAGT-
 C T G A A C T G A G T C T G C A C G T A G T A C C T A G G T C A C T A G A C T G A T G C C G A T A C T G
T C G A C T A G C T G A C G T A C G T A A G T C T A C G C G T A C G T A C G T A A T C G A C G T A C G T

PB0055.1_Rfx4_1/Jaspar

Match Rank:4
Score:0.53
Offset:-6
Orientation:forward strand
Alignment:------RGCAAMGAGGCTG
TACCATAGCAACGGT----
 A C G T A C G T A C G T A C G T A C G T A C G T C T G A A C T G A G T C T G C A C G T A G T A C C T A G G T C A C T A G A C T G A T G C C G A T A C T G
A G C T G T C A T A G C A T G C G T C A A G C T T C G A C T A G G A T C C T G A C T G A A G T C T A C G T C A G C G A T A C G T A C G T A C G T A C G T

PB0147.1_Max_2/Jaspar

Match Rank:5
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-RGCAAMGAGGCTG
GTGCCACGCGACTG
 A C G T C T G A A C T G A G T C T G C A C G T A G T A C C T A G G T C A C T A G A C T G A T G C C G A T A C T G
A C T G A G C T A C T G G A T C A G T C C G T A A G T C T C A G G A T C A C T G T C G A T G A C C A G T C A T G

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.52
Offset:-4
Orientation:forward strand
Alignment:----RGCAAMGAGGCTG
SCCTAGCAACAG-----
 A C G T A C G T A C G T A C G T C T G A A C T G A G T C T G C A C G T A G T A C C T A G G T C A C T A G A C T G A T G C C G A T A C T G
A T G C A G T C G T A C A G C T T C G A C T A G G A T C C T G A G T C A A G T C G C T A T C A G A C G T A C G T A C G T A C G T A C G T

Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer

Match Rank:7
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:RGCAAMGAGGCTG
-GTAAACAG----
 C T G A A C T G A G T C T G C A C G T A G T A C C T A G G T C A C T A G A C T G A T G C C G A T A C T G
A C G T C T A G C A G T G T C A C G T A C T G A A G T C C G T A T A C G A C G T A C G T A C G T A C G T

Creb3l2/MA0608.1/Jaspar

Match Rank:8
Score:0.51
Offset:1
Orientation:forward strand
Alignment:RGCAAMGAGGCTG
-GCCACGTGT---
 C T G A A C T G A G T C T G C A C G T A G T A C C T A G G T C A C T A G A C T G A T G C C G A T A C T G
A C G T A C T G G T A C A T G C C G T A A G T C A C T G A C G T A T C G C A G T A C G T A C G T A C G T

PB0200.1_Zfp187_2/Jaspar

Match Rank:9
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--RGCAAMGAGGCTG-
NNAGGGACAAGGGCNC
 A C G T A C G T C T G A A C T G A G T C T G C A C G T A G T A C C T A G G T C A C T A G A C T G A T G C C G A T A C T G A C G T
A G C T C G A T C T G A C A T G C T A G C T A G C G T A A G T C T C G A C T G A C T A G C T A G C A T G A G T C G A C T G T A C

Foxo1/MA0480.1/Jaspar

Match Rank:10
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:RGCAAMGAGGCTG
TGTAAACAGGA--
 C T G A A C T G A G T C T G C A C G T A G T A C C T A G G T C A C T A G A C T G A T G C C G A T A C T G
C G A T C T A G C G A T G T C A C G T A C G T A A G T C C G T A T C A G T A C G G T C A A C G T A C G T