Information for 5-CAGAGKKCCCAAGACC (Motif 17)

A G T C G C T A A T C G C G T A C T A G A C T G A C G T A G T C A G T C G A T C C G T A G C T A A C T G C G T A A T G C T G A C
Reverse Opposite:
A C T G A T C G C G A T A G T C C G A T C G A T C T A G A C T G T A C G T G C A G T A C A G T C A C G T A T G C C G A T A C T G
p-value:1e-13
log p-value:-3.132e+01
Information Content per bp:1.787
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.80%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets49.1 +/- 21.8bp
Average Position of motif in Background78.2 +/- 16.2bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:1
Score:0.52
Offset:9
Orientation:forward strand
Alignment:CAGAGKKCCCAAGACC
---------CATGAC-
 A G T C G C T A A T C G C G T A C T A G A C T G A C G T A G T C A G T C G A T C C G T A G C T A A C T G C G T A A T G C T G A C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C T C G A A C G T C A T G C G T A A G T C A C G T

Stat5a::Stat5b/MA0519.1/Jaspar

Match Rank:2
Score:0.49
Offset:4
Orientation:forward strand
Alignment:CAGAGKKCCCAAGACC
----ATTTCCAAGAA-
 A G T C G C T A A T C G C G T A C T A G A C T G A C G T A G T C A G T C G A T C C G T A G C T A A C T G C G T A A T G C T G A C
A C G T A C G T A C G T A C G T C T G A A G C T A C G T A G C T A G T C G A T C G T C A C T G A A C T G G C T A C T G A A C G T

NFIA/MA0670.1/Jaspar

Match Rank:3
Score:0.48
Offset:4
Orientation:forward strand
Alignment:CAGAGKKCCCAAGACC
----GGTGCCAAGT--
 A G T C G C T A A T C G C G T A C T A G A C T G A C G T A G T C A G T C G A T C C G T A G C T A A C T G C G T A A T G C T G A C
A C G T A C G T A C G T A C G T T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T A C G T A C G T

Hnf4a/MA0114.3/Jaspar

Match Rank:4
Score:0.48
Offset:3
Orientation:forward strand
Alignment:CAGAGKKCCCAAGACC---
---GGGGTCAAAGTCCAAT
 A G T C G C T A A T C G C G T A C T A G A C T G A C G T A G T C A G T C G A T C C G T A G C T A A C T G C G T A A T G C T G A C A C G T A C G T A C G T
A C G T A C G T A C G T T C A G T C A G C T A G C A T G C A G T A G T C T C G A C T G A C T G A A C T G A C G T A G T C A G T C C T G A T C G A G A C T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.47
Offset:9
Orientation:reverse strand
Alignment:CAGAGKKCCCAAGACC-
---------CCAGACAG
 A G T C G C T A A T C G C G T A C T A G A C T G A C G T A G T C A G T C G A T C C G T A G C T A A C T G C G T A A T G C T G A C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G

Pax2/MA0067.1/Jaspar

Match Rank:6
Score:0.47
Offset:8
Orientation:reverse strand
Alignment:CAGAGKKCCCAAGACC
--------NCGTGACN
 A G T C G C T A A T C G C G T A C T A G A C T G A C G T A G T C A G T C G A T C C G T A G C T A A C T G C G T A A T G C T G A C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G G T A C C T A G A G C T T C A G C G T A G A T C C G A T

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:7
Score:0.47
Offset:5
Orientation:reverse strand
Alignment:CAGAGKKCCCAAGACC-
-----TGACCTTGACCT
 A G T C G C T A A T C G C G T A C T A G A C T G A C G T A G T C A G T C G A T C C G T A G C T A A C T G C G T A A T G C T G A C A C G T
A C G T A C G T A C G T A C G T A C G T G A C T T C A G T G C A A G T C A G T C G A C T A C G T T A C G C G T A G T A C G A T C G A C T

PROX1/MA0794.1/Jaspar

Match Rank:8
Score:0.47
Offset:9
Orientation:forward strand
Alignment:CAGAGKKCCCAAGACC-----
---------CAAGACGCCTTA
 A G T C G C T A A T C G C G T A C T A G A C T G A C G T A G T C A G T C G A T C C G T A G C T A A C T G C G T A A T G C T G A C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C T G A G C T A C T A G T C G A G A T C C A T G G A T C A G T C C A G T A G C T T C G A

NFIC/MA0161.1/Jaspar

Match Rank:9
Score:0.46
Offset:6
Orientation:reverse strand
Alignment:CAGAGKKCCCAAGACC
------TGCCAA----
 A G T C G C T A A T C G C G T A C T A G A C T G A C G T A G T C A G T C G A T C C G T A G C T A A C T G C G T A A T G C T G A C
A C G T A C G T A C G T A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T A C G T

Rfx1/MA0509.1/Jaspar

Match Rank:10
Score:0.46
Offset:4
Orientation:reverse strand
Alignment:CAGAGKKCCCAAGACC--
----GTTGCCATGGNAAC
 A G T C G C T A A T C G C G T A C T A G A C T G A C G T A G T C A G T C G A T C C G T A G C T A A C T G C G T A A T G C T G A C A C G T A C G T
A C G T A C G T A C G T A C G T A C T G A G C T G A C T C A T G A G T C A G T C C G T A C G A T C T A G T C A G T G A C C T G A T G C A G A T C