Information for 4-AATGACAVCA (Motif 7)

C T G A C G T A A C G T A C T G G C T A G T A C C G T A T C G A G A T C C G T A
Reverse Opposite:
G C A T C T A G A G C T A C G T C A T G C G A T A G T C C G T A A C G T A G C T
p-value:1e-16
log p-value:-3.844e+01
Information Content per bp:1.708
Number of Target Sequences with motif46.0
Percentage of Target Sequences with motif5.29%
Number of Background Sequences with motif506.9
Percentage of Background Sequences with motif1.12%
Average Position of motif in Targets48.2 +/- 24.0bp
Average Position of motif in Background52.5 +/- 32.9bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:1
Score:0.82
Offset:0
Orientation:reverse strand
Alignment:AATGACAVCA
RHTGWCAR--
 C T G A C G T A A C G T A C T G G C T A G T A C C G T A T C G A G A T C C G T A
C T A G G T A C A G C T C T A G G C T A G A T C C G T A C T G A A C G T A C G T

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:2
Score:0.78
Offset:-1
Orientation:reverse strand
Alignment:-AATGACAVCA
ARNTGACA---
 A C G T C T G A C G T A A C G T A C T G G C T A G T A C C G T A T C G A G A T C C G T A
T G C A C T A G G A T C A C G T C T A G C G T A G T A C T C G A A C G T A C G T A C G T

MEIS1/MA0498.2/Jaspar

Match Rank:3
Score:0.77
Offset:1
Orientation:forward strand
Alignment:AATGACAVCA
-TTGACAG--
 C T G A C G T A A C G T A C T G G C T A G T A C C G T A T C G A G A T C C G T A
A C G T G C A T G C A T A T C G T G C A A G T C C T G A C T A G A C G T A C G T

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:4
Score:0.77
Offset:0
Orientation:forward strand
Alignment:AATGACAVCA
CATGAC----
 C T G A C G T A A C G T A C T G G C T A G T A C C G T A T C G A G A T C C G T A
T A G C T C G A A C G T C A T G C G T A A G T C A C G T A C G T A C G T A C G T

MEIS3/MA0775.1/Jaspar

Match Rank:5
Score:0.75
Offset:1
Orientation:forward strand
Alignment:AATGACAVCA
-TTGACAGG-
 C T G A C G T A A C G T A C T G G C T A G T A C C G T A T C G A G A T C C G T A
A C G T C G A T G C A T A T C G C T G A G A T C C T G A A C T G A T C G A C G T

PH0164.1_Six4/Jaspar

Match Rank:6
Score:0.74
Offset:-3
Orientation:forward strand
Alignment:---AATGACAVCA----
ATAAATGACACCTATCA
 A C G T A C G T A C G T C T G A C G T A A C G T A C T G G C T A G T A C C G T A T C G A G A T C C G T A A C G T A C G T A C G T A C G T
G C T A C A G T C T G A G T C A G C T A A G C T C A T G G T C A A G T C G T C A G T A C A G T C A G C T G T C A A G C T A G T C T C G A

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:7
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-AATGACAVCA
VGCTGWCAVB-
 A C G T C T G A C G T A A C G T A C T G G C T A G T A C C G T A T C G A G A T C C G T A
T C A G T A C G T A G C A C G T A C T G C G A T A G T C C G T A T A C G A G T C A C G T

PH0169.1_Tgif1/Jaspar

Match Rank:8
Score:0.72
Offset:-3
Orientation:forward strand
Alignment:---AATGACAVCA----
GATATTGACAGCTGCGT
 A C G T A C G T A C G T C T G A C G T A A C G T A C T G G C T A G T A C C G T A T C G A G A T C C G T A A C G T A C G T A C G T A C G T
C A G T C T G A A C G T C G T A C G A T C G A T A C T G C G T A A G T C C T G A C T A G A T G C A C G T T A C G T A G C A C T G C G A T

MEIS2/MA0774.1/Jaspar

Match Rank:9
Score:0.71
Offset:1
Orientation:forward strand
Alignment:AATGACAVCA
-TTGACAGC-
 C T G A C G T A A C G T A C T G G C T A G T A C C G T A T C G A G A T C C G T A
A C G T C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C A C G T

JUN/MA0488.1/Jaspar

Match Rank:10
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:AATGACAVCA----
-ATGACATCATCNN
 C T G A C G T A A C G T A C T G G C T A G T A C C G T A T C G A G A T C C G T A A C G T A C G T A C G T A C G T
A C G T T C G A A C G T A C T G C T G A A T G C T G C A C G A T G T A C C G T A A G C T G A T C G C A T G C A T