Information for 3-TTGACCTTTG (Motif 3)

A G C T A C G T A T C G G C T A G T A C A G T C G C A T G A C T A G C T T C A G
Reverse Opposite:
A G T C T C G A C T G A C G T A C T A G C A T G C G A T A T G C T G C A T C G A
p-value:1e-25
log p-value:-5.960e+01
Information Content per bp:1.693
Number of Target Sequences with motif85.0
Percentage of Target Sequences with motif9.77%
Number of Background Sequences with motif1098.5
Percentage of Background Sequences with motif2.44%
Average Position of motif in Targets53.3 +/- 25.4bp
Average Position of motif in Background50.0 +/- 30.2bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.94
Offset:0
Orientation:reverse strand
Alignment:TTGACCTTTG
CTGACCTTTG
 A G C T A C G T A T C G G C T A G T A C A G T C G C A T G A C T A G C T T C A G
A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G

PB0053.1_Rara_1/Jaspar

Match Rank:2
Score:0.93
Offset:-3
Orientation:reverse strand
Alignment:---TTGACCTTTG---
NNNGTGACCTTTGNNN
 A C G T A C G T A C G T A G C T A C G T A T C G G C T A G T A C A G T C G C A T G A C T A G C T T C A G A C G T A C G T A C G T
G T A C C G T A A T C G C T A G A G C T T C A G G T C A G T A C G T A C A G C T A G C T C G A T C A T G T C G A C A T G G T C A

PB0049.1_Nr2f2_1/Jaspar

Match Rank:3
Score:0.93
Offset:-3
Orientation:reverse strand
Alignment:---TTGACCTTTG---
NNNNTGACCTTTNNNN
 A C G T A C G T A C G T A G C T A C G T A T C G G C T A G T A C A G T C G C A T G A C T A G C T T C A G A C G T A C G T A C G T
A G T C C G A T A T G C C A T G A G C T T C A G G T C A G T A C G T A C A G C T A G C T G C A T C A T G T C G A C A T G G T C A

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:4
Score:0.89
Offset:1
Orientation:forward strand
Alignment:TTGACCTTTG---
-TGACCTTTNCNT
 A G C T A C G T A T C G G C T A G T A C A G T C G C A T G A C T A G C T T C A G A C G T A C G T A C G T
A C G T A C G T C T A G C G T A A G T C G T A C A C G T A C G T A C G T G T C A G T A C T G A C G A C T

NR2F1/MA0017.2/Jaspar

Match Rank:5
Score:0.89
Offset:-3
Orientation:reverse strand
Alignment:---TTGACCTTTG
CNNTTGACCTTTG
 A C G T A C G T A C G T A G C T A C G T A T C G G C T A G T A C A G T C G C A T G A C T A G C T T C A G
G A T C A G T C A G T C C A G T A G C T A C T G C G T A A G T C A T G C A G C T G A C T C G A T C A T G

Nr2f6/MA0677.1/Jaspar

Match Rank:6
Score:0.84
Offset:1
Orientation:reverse strand
Alignment:TTGACCTTTG-----
-TGACCTTTGACCTN
 A G C T A C G T A T C G G C T A G T A C A G T C G C A T G A C T A G C T T C A G A C G T A C G T A C G T A C G T A C G T
A C G T A G C T T C A G T G C A G T A C G T A C A G C T G A C T G A C T T C A G T G C A G T A C G T A C A G C T A G T C

NR4A2/MA0160.1/Jaspar

Match Rank:7
Score:0.83
Offset:0
Orientation:reverse strand
Alignment:TTGACCTTTG
GTGACCTT--
 A G C T A C G T A T C G G C T A G T A C A G T C G C A T G A C T A G C T T C A G
A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T A C G T A C G T

HNF4G/MA0484.1/Jaspar

Match Rank:8
Score:0.83
Offset:1
Orientation:reverse strand
Alignment:TTGACCTTTG------
-TGGACTTTGNNCTCN
 A G C T A C G T A T C G G C T A G T A C A G T C G C A T G A C T A G C T T C A G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T T C A G T C A G G T C A G A T C G A C T A G T C G C A T

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:9
Score:0.83
Offset:1
Orientation:reverse strand
Alignment:TTGACCTTTG-----
-TGACCTTTGCCCTA
 A G C T A C G T A T C G G C T A G T A C A G T C G C A T G A C T A G C T T C A G A C G T A C G T A C G T A C G T A C G T
A C G T A G C T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G T G A C G A T C G A T C G A C T T C G A

Rxra/MA0512.2/Jaspar

Match Rank:10
Score:0.83
Offset:1
Orientation:reverse strand
Alignment:TTGACCTTTG-----
-TGACCTTTGACCCC
 A G C T A C G T A T C G G C T A G T A C A G T C G C A T G A C T A G C T T C A G A C G T A C G T A C G T A C G T A C G T
A C G T A G C T T C A G T G C A T G A C T A G C A G C T G A C T A G C T T C A G T G C A G T A C G T A C A G T C A G T C