Information for 20-TCTGAAACTCATT (Motif 28)

A G C T A G T C A C G T A C T G C G T A C G T A C G T A A G T C A C G T A G T C G T C A A C G T A C G T
Reverse Opposite:
C G T A G T C A A C G T A C T G C G T A A C T G A C G T A C G T A C G T A G T C C G T A A C T G C T G A
p-value:1e-8
log p-value:-1.899e+01
Information Content per bp:1.924
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.46%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets51.5 +/- 25.4bp
Average Position of motif in Background45.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.65
Offset:0
Orientation:forward strand
Alignment:TCTGAAACTCATT
ACTGAAACCA---
 A G C T A G T C A C G T A C T G C G T A C G T A C G T A A G T C A C G T A G T C G T C A A C G T A C G T
G C T A T A G C A G C T A T C G G T C A C G T A G C T A A T G C G A T C C T G A A C G T A C G T A C G T

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:2
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TCTGAAACTCATT
TTTGAAACCG---
 A G C T A G T C A C G T A C T G C G T A C G T A C G T A A G T C A C G T A G T C G T C A A C G T A C G T
A C G T A C G T A C G T T A C G C G T A C T G A C G T A G T A C A G T C A T C G A C G T A C G T A C G T

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:3
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-TCTGAAACTCATT
GSCTGTCACTCA--
 A C G T A G C T A G T C A C G T A C T G C G T A C G T A C G T A A G T C A C G T A G T C G T C A A C G T A C G T
C T A G A T G C A T G C C G A T A C T G G A C T A T G C G C T A T G A C A G C T T A G C G C T A A C G T A C G T

PH0151.1_Pou6f1_1/Jaspar

Match Rank:4
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:TCTGAAACTCATT------
--NNNACCTCATTATCNTN
 A G C T A G T C A C G T A C T G C G T A C G T A C G T A A G T C A C G T A G T C G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C A T G G A T C G T C A C G T A T A C G G T A C A C G T G T A C C G T A C G A T C G A T C G T A C G A T A T G C A C T G C G A T A G T C

PH0152.1_Pou6f1_2/Jaspar

Match Rank:5
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:TCTGAAACTCATT------
--GCAACCTCATTATNNNN
 A G C T A G T C A C G T A C T G C G T A C G T A C G T A A G T C A C G T A G T C G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C A T G G T A C G T C A C G T A A T G C G T A C A C G T G T A C C G T A A C G T C G A T C G T A C G A T A T C G C G A T C A G T A G C T

POU6F2/MA0793.1/Jaspar

Match Rank:6
Score:0.57
Offset:5
Orientation:forward strand
Alignment:TCTGAAACTCATT--
-----AGCTCATTAT
 A G C T A G T C A C G T A C T G C G T A C G T A C G T A A G T C A C G T A G T C G T C A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T G A T A C G G A T C C A G T G T A C G T C A A G C T A C G T G C T A G C A T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.57
Offset:0
Orientation:forward strand
Alignment:TCTGAAACTCATT
NCTGTCAATCAN-
 A G C T A G T C A C G T A C T G C G T A C G T A C G T A A G T C A C G T A G T C G T C A A C G T A C G T
T A G C T A G C G A C T C T A G A G C T A G T C G T C A T G C A A C G T A T G C G C T A T G C A A C G T

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:8
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---TCTGAAACTCATT
GAAACTGAAACT----
 A C G T A C G T A C G T A G C T A G T C A C G T A C T G C G T A C G T A C G T A A G T C A C G T A G T C G T C A A C G T A C G T
T C A G C T G A G T C A C G T A A T G C G A C T A T C G G T C A C T G A C T G A T A G C G A C T A C G T A C G T A C G T A C G T

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:9
Score:0.55
Offset:0
Orientation:forward strand
Alignment:TCTGAAACTCATT
SCTGTCAVTCAV-
 A G C T A G T C A C G T A C T G C G T A C G T A C G T A A G T C A C G T A G T C G T C A A C G T A C G T
T A C G A T G C G A C T A C T G A G C T A G T C G T C A T G C A A C G T A G T C G C T A T G C A A C G T

PB0037.1_Isgf3g_1/Jaspar

Match Rank:10
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----TCTGAAACTCATT
CAAAATCGAAACTAA--
 A C G T A C G T A C G T A C G T A G C T A G T C A C G T A C T G C G T A C G T A C G T A A G T C A C G T A G T C G T C A A C G T A C G T
T G A C C T G A C T G A C G T A G C T A G C A T A G T C C T A G G T C A C G T A G C T A T A G C G A C T C G T A G C T A A C G T A C G T