Information for 2-NVTGACGTMR (Motif 2)

A T C G T A C G G C A T A C T G C T G A A G T C T C A G G A C T G T A C T C G A
Reverse Opposite:
A G C T C A T G C T G A A G T C T C A G G A C T T G A C C G T A A G T C T A G C
p-value:1e-43
log p-value:-1.004e+02
Information Content per bp:1.528
Number of Target Sequences with motif247.0
Percentage of Target Sequences with motif28.39%
Number of Background Sequences with motif5004.5
Percentage of Background Sequences with motif11.09%
Average Position of motif in Targets52.9 +/- 21.7bp
Average Position of motif in Background48.7 +/- 36.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.93
Offset:0
Orientation:forward strand
Alignment:NVTGACGTMR
GATGACGTCA
 A T C G T A C G G C A T A C T G C T G A A G T C T C A G G A C T G T A C T C G A
T A C G T C G A G A C T A C T G C T G A A G T C T C A G G A C T T G A C C T G A

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:2
Score:0.92
Offset:2
Orientation:forward strand
Alignment:NVTGACGTMR
--TGACGT--
 A T C G T A C G G C A T A C T G C T G A A G T C T C A G G A C T G T A C T C G A
A C G T A C G T A C G T C A T G C G T A A G T C A C T G G A C T A C G T A C G T

CREB1/MA0018.2/Jaspar

Match Rank:3
Score:0.92
Offset:2
Orientation:forward strand
Alignment:NVTGACGTMR
--TGACGTCA
 A T C G T A C G G C A T A C T G C T G A A G T C T C A G G A C T G T A C T C G A
A C G T A C G T A C G T A T C G C G T A A T G C C T A G A G C T G T A C C G T A

Crem/MA0609.1/Jaspar

Match Rank:4
Score:0.90
Offset:0
Orientation:forward strand
Alignment:NVTGACGTMR
TATGACGTAA
 A T C G T A C G G C A T A C T G C T G A A G T C T C A G G A C T G T A C T C G A
A C G T C T G A A C G T A C T G C G T A A G T C A C T G A C G T G T C A C G T A

Atf1/MA0604.1/Jaspar

Match Rank:5
Score:0.90
Offset:1
Orientation:forward strand
Alignment:NVTGACGTMR
-ATGACGTA-
 A T C G T A C G G C A T A C T G C T G A A G T C T C A G G A C T G T A C T C G A
A C G T T C G A G C A T A C T G C G T A A G T C C T A G G A C T T C G A A C G T

Atf7(bZIP)/3T3L1-Atf7-ChIP-Seq(GSE56872)/Homer

Match Rank:6
Score:0.89
Offset:-1
Orientation:forward strand
Alignment:-NVTGACGTMR-
NGRTGACGTCAY
 A C G T A T C G T A C G G C A T A C T G C T G A A G T C T C A G G A C T G T A C T C G A A C G T
T A G C C T A G T C G A G A C T A C T G C T G A A G T C T C A G G C A T T G A C C T G A A G C T

PB0004.1_Atf1_1/Jaspar

Match Rank:7
Score:0.88
Offset:-2
Orientation:reverse strand
Alignment:--NVTGACGTMR----
NCGATGACGTCATCGN
 A C G T A C G T A T C G T A C G G C A T A C T G C T G A A G T C T C A G G A C T G T A C T C G A A C G T A C G T A C G T A C G T
G A C T G A T C C A T G T C G A A G C T A C T G C G T A A G T C C T A G G C A T G T A C C T G A A G C T G T A C T C A G G A C T

Atf2(bZIP)/3T3L1-Atf2-ChIP-Seq(GSE56872)/Homer

Match Rank:8
Score:0.87
Offset:-1
Orientation:forward strand
Alignment:-NVTGACGTMR-
NRRTGACGTCAT
 A C G T A T C G T A C G G C A T A C T G C T G A A G T C T C A G G A C T G T A C T C G A A C G T
A T G C T C A G T C G A G C A T A C T G C G T A A G T C T C A G G A C T T G A C C G T A A G C T

CRE(bZIP)/Promoter/Homer

Match Rank:9
Score:0.87
Offset:-1
Orientation:forward strand
Alignment:-NVTGACGTMR-
CGGTGACGTCAC
 A C G T A T C G T A C G G C A T A C T G C T G A A G T C T C A G G A C T G T A C T C G A A C G T
A T G C A T C G T A C G A G C T A T C G C T G A A G T C C T A G A G C T A T G C C T G A A T G C

PB0038.1_Jundm2_1/Jaspar

Match Rank:10
Score:0.87
Offset:-2
Orientation:reverse strand
Alignment:--NVTGACGTMR----
NCGATGACGTCATCGN
 A C G T A C G T A T C G T A C G G C A T A C T G C T G A A G T C T C A G G A C T G T A C T C G A A C G T A C G T A C G T A C G T
C T G A A G T C C A T G T C G A A G C T A C T G C G T A A G T C C T A G G C A T T G A C C T G A A G C T T G A C T A C G T A C G