Information for 5-TGCAATGACAGAG (Motif 5)

G C A T A C T G A G T C C G T A T C G A G A C T A C T G T G C A A G T C C G T A T A C G C G T A T C A G
Reverse Opposite:
A G T C A C G T A G T C C G A T A C T G A C G T A G T C C G T A A C G T C G A T A C T G T G A C C G T A
p-value:1e-16
log p-value:-3.755e+01
Information Content per bp:1.776
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.41%
Number of Background Sequences with motif13.2
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets51.0 +/- 27.3bp
Average Position of motif in Background49.1 +/- 21.7bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Ddit3::Cebpa/MA0019.1/Jaspar

Match Rank:1
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---TGCAATGACAGAG
AGATGCAATCCC----
 A C G T A C G T A C G T G C A T A C T G A G T C C G T A T C G A G A C T A C T G T G C A A G T C C G T A T A C G C G T A T C A G
T C G A C T A G C T G A A G C T A C T G G T A C G T C A T G C A A G C T T G A C T A G C A G T C A C G T A C G T A C G T A C G T

MEIS1/MA0498.2/Jaspar

Match Rank:2
Score:0.65
Offset:4
Orientation:forward strand
Alignment:TGCAATGACAGAG
----TTGACAG--
 G C A T A C T G A G T C C G T A T C G A G A C T A C T G T G C A A G T C C G T A T A C G C G T A T C A G
A C G T A C G T A C G T A C G T G C A T G C A T A T C G T G C A A G T C C T G A C T A G A C G T A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:3
Score:0.62
Offset:2
Orientation:forward strand
Alignment:TGCAATGACAGAG
--CAAGGHCANV-
 G C A T A C T G A G T C C G T A T C G A G A C T A C T G T G C A A G T C C G T A T A C G C G T A T C A G
A C G T A C G T T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G A C G T

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:4
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:TGCAATGACAGAG
---RHTGWCAR--
 G C A T A C T G A G T C C G T A T C G A G A C T A C T G T G C A A G T C C G T A T A C G C G T A T C A G
A C G T A C G T A C G T C T A G G T A C A G C T C T A G G C T A G A T C C G T A C T G A A C G T A C G T

MEIS3/MA0775.1/Jaspar

Match Rank:5
Score:0.61
Offset:4
Orientation:forward strand
Alignment:TGCAATGACAGAG
----TTGACAGG-
 G C A T A C T G A G T C C G T A T C G A G A C T A C T G T G C A A G T C C G T A T A C G C G T A T C A G
A C G T A C G T A C G T A C G T C G A T G C A T A T C G C T G A G A T C C T G A A C T G A T C G A C G T

MEIS2/MA0774.1/Jaspar

Match Rank:6
Score:0.59
Offset:4
Orientation:forward strand
Alignment:TGCAATGACAGAG
----TTGACAGC-
 G C A T A C T G A G T C C G T A T C G A G A C T A C T G T G C A A G T C C G T A T A C G C G T A T C A G
A C G T A C G T A C G T A C G T C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:7
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TGCAATGACAGAG
NTCAAGGTCA---
 G C A T A C T G A G T C C G T A T C G A G A C T A C T G T G C A A G T C C G T A T A C G C G T A T C A G
A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A A C G T A C G T A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:8
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:TGCAATGACAGAG-
----ATGCCAGACN
 G C A T A C T G A G T C C G T A T C G A G A C T A C T G T G C A A G T C C G T A T A C G C G T A T C A G A C G T
A C G T A C G T A C G T A C G T C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:9
Score:0.58
Offset:3
Orientation:forward strand
Alignment:TGCAATGACAGAG
---CATGAC----
 G C A T A C T G A G T C C G T A T C G A G A C T A C T G T G C A A G T C C G T A T A C G C G T A T C A G
A C G T A C G T A C G T T A G C T C G A A C G T C A T G C G T A A G T C A C G T A C G T A C G T A C G T

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:10
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:TGCAATGACAGAG
--ARNTGACA---
 G C A T A C T G A G T C C G T A T C G A G A C T A C T G T G C A A G T C C G T A T A C G C G T A T C A G
A C G T A C G T T G C A C T A G G A T C A C G T C T A G C G T A G T A C T C G A A C G T A C G T A C G T