Information for 3-CTGGACTTTG (Motif 3)

A G T C G C A T C A T G C T A G G T C A T A G C A G C T A G C T C G A T A T C G
Reverse Opposite:
A T G C C G T A T C G A C T G A A T C G C A G T G A T C G T A C C G T A T C A G
p-value:1e-22
log p-value:-5.148e+01
Information Content per bp:1.673
Number of Target Sequences with motif99.0
Percentage of Target Sequences with motif11.28%
Number of Background Sequences with motif1707.2
Percentage of Background Sequences with motif3.59%
Average Position of motif in Targets48.1 +/- 25.6bp
Average Position of motif in Background51.2 +/- 28.4bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.16
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:1
Score:0.88
Offset:1
Orientation:reverse strand
Alignment:CTGGACTTTG-------
-TGGACTTTGNNCTNTG
 A G T C G C A T C A T G C T A G G T C A T A G C A G C T A G C T C G A T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T C T A G T C G A G T A C G A T C G A C T A G T C C G A T C A T G

HNF4G/MA0484.1/Jaspar

Match Rank:2
Score:0.87
Offset:1
Orientation:reverse strand
Alignment:CTGGACTTTG------
-TGGACTTTGNNCTCN
 A G T C G C A T C A T G C T A G G T C A T A G C A G C T A G C T C G A T A T C G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T T C A G T C A G G T C A G A T C G A C T A G T C G C A T

PB0134.1_Hnf4a_2/Jaspar

Match Rank:3
Score:0.84
Offset:-3
Orientation:reverse strand
Alignment:---CTGGACTTTG---
NNATTGGACTTTNGNN
 A C G T A C G T A C G T A G T C G C A T C A T G C T A G G T C A T A G C A G C T A G C T C G A T A T C G A C G T A C G T A C G T
C G A T C A G T G C T A C A G T G A C T C T A G C A T G G T C A G T A C A G C T G A C T G C A T C A G T C T A G T G A C T G A C

Hnf4a/MA0114.3/Jaspar

Match Rank:4
Score:0.82
Offset:-1
Orientation:reverse strand
Alignment:-CTGGACTTTG-----
ATTGGACTTTGACCCC
 A C G T A G T C G C A T C A T G C T A G G T C A T A G C A G C T A G C T C G A T A T C G A C G T A C G T A C G T A C G T A C G T
C T G A A G C T G A C T T C A G T C A G T G C A T G A C A G C T G A C T A G C T T C A G G T C A G T A C G A T C A G T C A G T C

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.76
Offset:0
Orientation:reverse strand
Alignment:CTGGACTTTG
CTGACCTTTG
 A G T C G C A T C A T G C T A G G T C A T A G C A G C T A G C T C G A T A T C G
A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G

PB0014.1_Esrra_1/Jaspar

Match Rank:6
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---CTGGACTTTG----
NNNNATGACCTTGANTN
 A C G T A C G T A C G T A G T C G C A T C A T G C T A G G T C A T A G C A G C T A G C T C G A T A T C G A C G T A C G T A C G T A C G T
C A G T G T A C T C A G A G T C C G T A A G C T T C A G G C T A G A T C G T A C A G C T G A C T A T C G T C G A G T C A C A G T G T C A

ESRRB/MA0141.3/Jaspar

Match Rank:7
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:CTGGACTTTG-
NATGACCTTGA
 A G T C G C A T C A T G C T A G G T C A T A G C A G C T A G C T C G A T A T C G A C G T
C G A T C G T A G A C T C T A G T C G A T A G C A G T C A G C T C G A T A T C G C T G A

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:8
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:CTGGACTTTG--
--TGACCTTGAV
 A G T C G C A T C A T G C T A G G T C A T A G C A G C T A G C T C G A T A T C G A C G T A C G T
A C G T A C G T G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A

Esrrg/MA0643.1/Jaspar

Match Rank:9
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:CTGGACTTTG-
-ATGACCTTGA
 A G T C G C A T C A T G C T A G G T C A T A G C A G C T A G C T C G A T A T C G A C G T
A C G T C G T A G A C T T C A G G T C A T A G C G T A C A G C T G A C T A T C G C T G A

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:10
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:CTGGACTTTG-----
-TGACCTTTGCCCTA
 A G T C G C A T C A T G C T A G G T C A T A G C A G C T A G C T C G A T A T C G A C G T A C G T A C G T A C G T A C G T
A C G T A G C T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G T G A C G A T C G A T C G A C T T C G A