Information for 2-CAAAGTTCARAGG (Motif 2)

G T A C C G T A G T C A C G T A A C T G C G A T A G C T A G T C C G T A C T A G C G T A C T A G A C T G
Reverse Opposite:
A G T C A G T C A C G T A G T C A C G T A C T G C T G A C G T A A G T C A C G T A C G T A C G T A C T G
p-value:1e-18
log p-value:-4.308e+01
Information Content per bp:1.849
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.97%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets43.8 +/- 22.0bp
Average Position of motif in Background78.9 +/- 6.9bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tcf7/MA0769.1/Jaspar

Match Rank:1
Score:0.80
Offset:1
Orientation:forward strand
Alignment:CAAAGTTCARAGG
-AAAGATCAAAGG
 G T A C C G T A G T C A C G T A A C T G C G A T A G C T A G T C C G T A C T A G C G T A C T A G A C T G
A C G T C T G A C T G A C G T A A T C G C G T A A C G T A T G C C G T A T C G A C G T A C T A G T C A G

LEF1/MA0768.1/Jaspar

Match Rank:2
Score:0.77
Offset:1
Orientation:forward strand
Alignment:CAAAGTTCARAGG---
-AAAGATCAAAGGGTT
 G T A C C G T A G T C A C G T A A C T G C G A T A G C T A G T C C G T A C T A G C G T A C T A G A C T G A C G T A C G T A C G T
A C G T T C G A C T G A C T G A T A C G C G T A G C A T T A G C C G T A C T G A C T G A T C A G T C A G T C A G C G A T G C A T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:3
Score:0.74
Offset:-7
Orientation:forward strand
Alignment:-------CAAAGTTCARAGG
CANAGNNCAAAGTCCA----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T A C C G T A G T C A C G T A A C T G C G A T A G C T A G T C C G T A C T A G C G T A C T A G A C T G
G T A C G C T A T C A G C T G A C T A G C A T G A G C T G A T C T G C A T C G A C T G A A C T G C A G T A G T C G A T C G C T A A C G T A C G T A C G T A C G T

HNF4G/MA0484.1/Jaspar

Match Rank:4
Score:0.74
Offset:-6
Orientation:forward strand
Alignment:------CAAAGTTCARAGG
AGAGTCCAAAGTCCA----
 A C G T A C G T A C G T A C G T A C G T A C G T G T A C C G T A G T C A C G T A A C T G C G A T A G C T A G T C C G T A C T A G C G T A C T A G A C T G
C G T A T C A G C T G A C T A G C A G T A G T C A G T C T G C A T C G A C T G A C A T G C A G T A G T C G A T C G C T A A C G T A C G T A C G T A C G T

TCF7L2/MA0523.1/Jaspar

Match Rank:5
Score:0.72
Offset:1
Orientation:forward strand
Alignment:CAAAGTTCARAGG--
-AAAGATCAAAGGAA
 G T A C C G T A G T C A C G T A A C T G C G A T A G C T A G T C C G T A C T A G C G T A C T A G A C T G A C G T A C G T
A C G T C T G A T C G A C T G A A T C G G C T A C G A T T A G C C G T A T C G A C T G A T C A G T C A G T C G A G T C A

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.72
Offset:0
Orientation:forward strand
Alignment:CAAAGTTCARAGG
CAAAGGTCAG---
 G T A C C G T A G T C A C G T A A C T G C G A T A G C T A G T C C G T A C T A G C G T A C T A G A C T G
A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G A C G T A C G T A C G T

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:7
Score:0.71
Offset:3
Orientation:forward strand
Alignment:CAAAGTTCARAGG
---ACWTCAAAGG
 G T A C C G T A G T C A C G T A A C T G C G A T A G C T A G T C C G T A C T A G C G T A C T A G A C T G
A C G T A C G T A C G T C G T A A T G C C G A T A C G T A G T C C G T A C G T A C G T A C T A G A T C G

PB0040.1_Lef1_1/Jaspar

Match Rank:8
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:CAAAGTTCARAGG----
NANAGATCAAAGGGNNN
 G T A C C G T A G T C A C G T A A C T G C G A T A G C T A G T C C G T A C T A G C G T A C T A G A C T G A C G T A C G T A C G T A C G T
A C T G G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C A G G C T A G A C T G A C T

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:9
Score:0.70
Offset:3
Orientation:forward strand
Alignment:CAAAGTTCARAGG--
---ACATCAAAGGNA
 G T A C C G T A G T C A C G T A A C T G C G A T A G C T A G T C C G T A C T A G C G T A C T A G A C T G A C G T A C G T
A C G T A C G T A C G T C T G A A T G C G C T A G C A T A T G C C G T A T C G A C T G A C T A G T C A G T A C G G T C A

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:10
Score:0.70
Offset:3
Orientation:forward strand
Alignment:CAAAGTTCARAGG
---ACATCAAAGG
 G T A C C G T A G T C A C G T A A C T G C G A T A G C T A G T C C G T A C T A G C G T A C T A G A C T G
A C G T A C G T A C G T C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G