Information for 9-CAVAGATCTTTGT (Motif 12)

T A G C G C T A T G C A C G T A A C T G C G T A C A G T A G T C C G A T A G C T A G C T A T C G A G C T
Reverse Opposite:
T C G A T A G C T C G A T C G A C G T A A C T G G T C A G C A T A G T C C G A T A C G T C G A T A T C G
p-value:1e-9
log p-value:-2.135e+01
Information Content per bp:1.660
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif2.55%
Number of Background Sequences with motif216.9
Percentage of Background Sequences with motif0.46%
Average Position of motif in Targets54.9 +/- 25.7bp
Average Position of motif in Background50.4 +/- 31.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:1
Score:0.71
Offset:1
Orientation:forward strand
Alignment:CAVAGATCTTTGT
-AGGVNCCTTTGT
 T A G C G C T A T G C A C G T A A C T G C G T A C A G T A G T C C G A T A G C T A G C T A T C G A G C T
A C G T C G T A C T A G T C A G T C A G A G T C A T G C A G T C G C A T A G C T A C G T A T C G C G A T

SOX10/MA0442.1/Jaspar

Match Rank:2
Score:0.70
Offset:7
Orientation:forward strand
Alignment:CAVAGATCTTTGT
-------CTTTGT
 T A G C G C T A T G C A C G T A A C T G C G T A C A G T A G T C C G A T A G C T A G C T A T C G A G C T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G A T A C G T A C G T A T C G A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:3
Score:0.66
Offset:6
Orientation:forward strand
Alignment:CAVAGATCTTTGT---
------CCWTTGTYYB
 T A G C G C T A T G C A C G T A A C T G C G T A C A G T A G T C C G A T A G C T A G C T A T C G A G C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:4
Score:0.65
Offset:6
Orientation:forward strand
Alignment:CAVAGATCTTTGT---
------YCTTTGTTCC
 T A G C G C T A T G C A C G T A A C T G C G T A C A G T A G T C C G A T A G C T A G C T A T C G A G C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C

PB0071.1_Sox4_1/Jaspar

Match Rank:5
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:CAVAGATCTTTGT------
--TNNTCCTTTGTTCTNNT
 T A G C G C T A T G C A C G T A A C T G C G T A C A G T A G T C C G A T A G C T A G C T A T C G A G C T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G A T C G T A T C A G A G C T A G T C A G T C C G A T A C G T C G A T T A C G C G A T A G C T G A T C G C A T G A C T T G A C C A G T

PB0061.1_Sox11_1/Jaspar

Match Rank:6
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:CAVAGATCTTTGT------
--NNNTCCTTTGTTCTNNN
 T A G C G C T A T G C A C G T A A C T G C G T A C A G T A G T C C G A T A G C T A G C T A T C G A G C T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G A T C G T A T C A G A G C T A G T C G A T C C G A T A C G T C G A T A C T G C G A T A G C T G A T C G C A T G C A T T G C A C G A T

PB0166.1_Sox12_2/Jaspar

Match Rank:7
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:CAVAGATCTTTGT------
---ANTCCTTTGTCTNNNN
 T A G C G C T A T G C A C G T A A C T G C G T A C A G T A G T C C G A T A G C T A G C T A T C G A G C T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G T A G C A T A C G T A G T C A T G C C G A T A G C T C G A T T C A G A C G T T A G C G A C T T C A G G C A T A C G T A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:CAVAGATCTTTGT
--CTGACCTTTG-
 T A G C G C T A T G C A C G T A A C T G C G T A C A G T A G T C C G A T A G C T A G C T A T C G A G C T
A C G T A C G T A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G A C G T

Sox3/MA0514.1/Jaspar

Match Rank:9
Score:0.61
Offset:6
Orientation:forward strand
Alignment:CAVAGATCTTTGT---
------CCTTTGTTTT
 T A G C G C T A T G C A C G T A A C T G C G T A C A G T A G T C C G A T A G C T A G C T A T C G A G C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T

HNF4G/MA0484.1/Jaspar

Match Rank:10
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:CAVAGATCTTTGT-----
---TGGACTTTGNNCTCN
 T A G C G C T A T G C A C G T A A C T G C G T A C A G T A G T C C G A T A G C T A G C T A T C G A G C T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T T C A G T C A G G T C A G A T C G A C T A G T C G C A T