Information for 25-TCTGAATGGCCTG (Motif 38)

A C G T A G T C A C G T A C T G C G T A C G T A A C G T A C T G A C T G A G T C A G T C A C G T A C T G
Reverse Opposite:
A G T C C G T A A C T G A C T G A G T C A G T C C G T A A C G T A C G T A G T C C G T A A C T G C G T A
p-value:1e-5
log p-value:-1.228e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.41%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets40.7 +/- 24.9bp
Average Position of motif in Background36.7 +/- 7.2bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFY(CCAAT)/Promoter/Homer

Match Rank:1
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:TCTGAATGGCCTG
-CCGATTGGCT--
 A C G T A G T C A C G T A C T G C G T A C G T A A C G T A C T G A C T G A G T C A G T C A C G T A C T G
A C G T A T G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T A C G T A C G T

Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:2
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:TCTGAATGGCCTG
-GTTAATGGCC--
 A C G T A G T C A C G T A C T G C G T A C G T A A C G T A C T G A C T G A G T C A G T C A C G T A C T G
A C G T A T C G A G C T C A G T T C G A C T G A C G A T C A T G C T A G A T G C G A T C A C G T A C G T

NFYB/MA0502.1/Jaspar

Match Rank:3
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:TCTGAATGGCCTG---
-CTGATTGGTCNATTT
 A C G T A G T C A C G T A C T G C G T A C G T A A C G T A C T G A C T G A G T C A G T C A C G T A C T G A C G T A C G T A C G T
A C G T A T G C A G C T A T C G C G T A A G C T A C G T A C T G A C T G G A C T A G T C T A G C T C G A C A G T C A G T A G C T

POL004.1_CCAAT-box/Jaspar

Match Rank:4
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:TCTGAATGGCCTG-
--TGATTGGCTANN
 A C G T A G T C A C G T A C T G C G T A C G T A A C G T A C T G A C T G A G T C A G T C A C G T A C T G A C G T
A C G T A C G T A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T

NFYA/MA0060.2/Jaspar

Match Rank:5
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----TCTGAATGGCCTG
AGAGTGCTGATTGGTCCA
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C T G C G T A C G T A A C G T A C T G A C T G A G T C A G T C A C G T A C T G
G C T A C A T G T G C A T A C G G A C T A C T G A G T C A G C T A T C G C T G A A G C T C G A T T C A G T A C G G A C T A G T C T A G C T C G A

PB0170.1_Sox17_2/Jaspar

Match Rank:6
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----TCTGAATGGCCTG
NTTNTATGAATGTGNNC
 A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C T G C G T A C G T A A C G T A C T G A C T G A G T C A G T C A C G T A C T G
G C T A G C A T A G C T C T A G A G C T T C G A A G C T A C T G G C T A C T G A C G A T T C A G C A G T C A T G T C A G C G A T A T G C

PB0178.1_Sox8_2/Jaspar

Match Rank:7
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----TCTGAATGGCCTG
NNTNTCATGAATGT----
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C T G C G T A C G T A A C G T A C T G A C T G A G T C A G T C A C G T A C T G
A T G C T A C G C A G T A C T G C G A T G A T C T G C A A G C T C T A G C G T A T C G A C G A T C T A G G A C T A C G T A C G T A C G T A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:8
Score:0.54
Offset:6
Orientation:forward strand
Alignment:TCTGAATGGCCTG-
------AGGCCTAG
 A C G T A G T C A C G T A C T G C G T A C G T A A C G T A C T G A C T G A G T C A G T C A C G T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:9
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:TCTGAATGGCCTG
-BTGABTGACAGS
 A C G T A G T C A C G T A C T G C G T A C G T A A C G T A C T G A C T G A G T C A G T C A C G T A C T G
A C G T A C G T C G A T A C T G C G T A A C G T A C G T A C T G C T G A A G T C C T G A T A C G A T G C

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.54
Offset:6
Orientation:forward strand
Alignment:TCTGAATGGCCTG-
------AGGCCTNG
 A C G T A G T C A C G T A C T G C G T A C G T A A C G T A C T G A C T G A G T C A G T C A C G T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G